RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 SLFN13Q68D06 897 aa21.86■■□□□ 1.09
VPS16-204ENST00000417508 SNRNP48Q6IEG0 339 aaKnown RBP21.86■■□□□ 1.09
VPS16-204ENST00000417508 CCDC129Q6ZRS4 1044 aa21.86■■□□□ 1.09
VPS16-204ENST00000417508 SLC38A10Q9HBR0 1119 aa21.86■■□□□ 1.09
VPS16-204ENST00000417508 ZMYND8Q9ULU4 1186 aaPredicted RBP21.86■■□□□ 1.09
VPS16-204ENST00000417508 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.86■■□□□ 1.09
VPS16-204ENST00000417508 FOXP2O15409 715 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 PGK2P07205 417 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 LRRC26Q2I0M4 334 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.85■■□□□ 1.09
VPS16-204ENST00000417508 CHURC1Q8WUH1 139 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 KIFC2Q96AC6 838 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 DDX11Q96FC9 970 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 GMCL1Q96IK5 515 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 FBXO40Q9UH90 709 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 PLXNA1Q9UIW2 1896 aa21.85■■□□□ 1.09
VPS16-204ENST00000417508 TSPY2A6NKD2 308 aa21.84■■□□□ 1.09
VPS16-204ENST00000417508 KBTBD13C9JR72 458 aa21.84■■□□□ 1.09
VPS16-204ENST00000417508 PLA2G6O60733 806 aa21.84■■□□□ 1.09
VPS16-204ENST00000417508 FGRP09769 529 aa21.84■■□□□ 1.09
VPS16-204ENST00000417508 PRAMEF19Q5SWL8 479 aa21.84■■□□□ 1.09
VPS16-204ENST00000417508 FAM160B2Q86V87 743 aa21.84■■□□□ 1.09
VPS16-204ENST00000417508 CHST13Q8NET6 341 aa21.84■■□□□ 1.09
VPS16-204ENST00000417508 LNPKQ9C0E8 428 aa21.84■■□□□ 1.09
VPS16-204ENST00000417508 ORC4O43929 436 aa21.83■■□□□ 1.09
VPS16-204ENST00000417508 CTDSPL2Q05D32 466 aa21.83■■□□□ 1.09
VPS16-204ENST00000417508 CPXCR1Q8N123 301 aa21.83■■□□□ 1.09
VPS16-204ENST00000417508 LRRC47Q8N1G4 583 aaKnown RBP21.83■■□□□ 1.09
VPS16-204ENST00000417508 STAG1Q8WVM7 1258 aa21.83■■□□□ 1.09
VPS16-204ENST00000417508 OSBPL3Q9H4L5 887 aa21.83■■□□□ 1.09
VPS16-204ENST00000417508 TRIM6-TRIM34B2RNG4 842 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 TMEM232C9JQI7 657 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 FGAP02671 866 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 SYN1P17600 705 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 SLC1A4P43007 532 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 STAT2P52630 851 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 MFAP1P55081 439 aaKnown RBP21.82■■□□□ 1.08
VPS16-204ENST00000417508 GJC2Q5T442 439 aaPredicted RBP21.82■■□□□ 1.08
VPS16-204ENST00000417508 VPS53Q5VIR6 699 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 ZNF467Q7Z7K2 595 aaPredicted RBP21.82■■□□□ 1.08
VPS16-204ENST00000417508 CHD1LQ86WJ1 897 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 CNPY2Q9Y2B0 182 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 RIPK3Q9Y572 518 aa21.82■■□□□ 1.08
VPS16-204ENST00000417508 DNAJC25-GNG10A0A024R161 153 aa21.81■■□□□ 1.08
VPS16-204ENST00000417508 RANBP6O60518 1105 aaKnown RBP21.81■■□□□ 1.08
VPS16-204ENST00000417508 RARBP10826 455 aa21.81■■□□□ 1.08
VPS16-204ENST00000417508 MAGEA10P43363 369 aaPredicted RBP21.81■■□□□ 1.08
VPS16-204ENST00000417508 NOVP48745 357 aa21.81■■□□□ 1.08
VPS16-204ENST00000417508 RCSD1Q6JBY9 416 aa21.81■■□□□ 1.08
VPS16-204ENST00000417508 MAMDC4Q6UXC1 1216 aa21.81■■□□□ 1.08
VPS16-204ENST00000417508 FAM227BQ96M60 508 aa21.81■■□□□ 1.08
VPS16-204ENST00000417508 RAVER2Q9HCJ3 691 aaKnown RBP21.81■■□□□ 1.08
VPS16-204ENST00000417508 IL17RBQ9NRM6 502 aa21.81■■□□□ 1.08
VPS16-204ENST00000417508 STX8Q9UNK0 236 aa21.81■■□□□ 1.08
VPS16-204ENST00000417508 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
VPS16-204ENST00000417508 SYNGAP1Q96PV0 1343 aa21.8■■□□□ 1.08
VPS16-204ENST00000417508 RANBP2P49792 3224 aaKnown RBP21.8■■□□□ 1.08
VPS16-204ENST00000417508 HSPD1P10809 573 aaKnown RBP21.8■■□□□ 1.08
VPS16-204ENST00000417508 NUCB1Q02818 461 aa21.8■■□□□ 1.08
VPS16-204ENST00000417508 LRRC41Q15345 812 aa21.8■■□□□ 1.08
VPS16-204ENST00000417508 B4GALNT3Q6L9W6 998 aa21.8■■□□□ 1.08
VPS16-204ENST00000417508 RILPL2Q969X0 211 aa21.8■■□□□ 1.08
VPS16-204ENST00000417508 A0A0D9SFI3 127 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 IGHDP01880 384 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 ZNF865P0CJ78 1059 aaPredicted RBP21.79■■□□□ 1.08
VPS16-204ENST00000417508 PCP11498 1178 aaKnown RBP21.79■■□□□ 1.08
VPS16-204ENST00000417508 AKR1A1P14550 325 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 MCCP23508 829 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 SLC4A3P48751 1232 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 TKFCQ3LXA3 575 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 ANO1Q5XXA6 986 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 SLC39A5Q6ZMH5 540 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 PLEKHM2Q8IWE5 1019 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 ANKRD35Q8N283 1001 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 XPNPEP3Q9NQH7 507 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 INCENPQ9NQS7 918 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 TCP11L1Q9NUJ3 509 aa21.79■■□□□ 1.08
VPS16-204ENST00000417508 ATN1P54259 1190 aaPredicted RBP21.78■■□□□ 1.08
VPS16-204ENST00000417508 IKQ13123 557 aaPredicted RBP21.78■■□□□ 1.08
VPS16-204ENST00000417508 NMIQ13287 307 aaPredicted RBP21.78■■□□□ 1.08
VPS16-204ENST00000417508 C1orf53Q5VUE5 145 aa21.78■■□□□ 1.08
VPS16-204ENST00000417508 RNF180Q86T96 592 aa21.78■■□□□ 1.08
VPS16-204ENST00000417508 EXOC6Q8TAG9 804 aa21.78■■□□□ 1.08
VPS16-204ENST00000417508 UBE2OQ9C0C9 1292 aaKnown RBP21.78■■□□□ 1.08
VPS16-204ENST00000417508 PRKAG2Q9UGJ0 569 aa21.78■■□□□ 1.08
VPS16-204ENST00000417508 ISY1Q9ULR0 285 aaKnown RBP21.78■■□□□ 1.08
VPS16-204ENST00000417508 CCDC171Q6TFL3 1326 aa21.78■■□□□ 1.08
VPS16-204ENST00000417508 SDSP20132 328 aa21.77■■□□□ 1.08
VPS16-204ENST00000417508 NT5C2P49902 561 aa21.77■■□□□ 1.08
VPS16-204ENST00000417508 RTP1P59025 263 aa21.77■■□□□ 1.08
VPS16-204ENST00000417508 FAM184BQ9ULE4 1060 aa21.77■■□□□ 1.08
VPS16-204ENST00000417508 TACC3Q9Y6A5 838 aa21.77■■□□□ 1.08
VPS16-204ENST00000417508 NMT2O60551 498 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 SNAI1O95863 264 aaPredicted RBP21.76■■□□□ 1.07
VPS16-204ENST00000417508 MYCNP04198 464 aaPredicted RBP21.76■■□□□ 1.07
VPS16-204ENST00000417508 TAL1P17542 331 aaPredicted RBP21.76■■□□□ 1.07
VPS16-204ENST00000417508 ADCYAP1R1P41586 468 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 SNX17Q15036 470 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 LRIT3Q3SXY7 679 aa21.76■■□□□ 1.07
VPS16-204ENST00000417508 GPR153Q6NV75 609 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms