RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 SGPL1O95470 568 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 EN2P19622 333 aaPredicted RBP12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 CHMLP26374 656 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 TMEM132BQ14DG7 1078 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 MTFR1Q15390 333 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 MMP19Q99542 508 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 UNC93B1Q9H1C4 597 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 FBXO28Q9NVF7 368 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 TMEM232C9JQI7 657 aa12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 ADORA2AP29274 412 aa12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 TKFCQ3LXA3 575 aa12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 SNRNP48Q6IEG0 339 aaKnown RBP12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 DGKHQ86XP1 1220 aa12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 TRIB2Q92519 343 aa12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 NUP88Q99567 741 aaPredicted RBP12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 PAK6Q9NQU5 681 aaPredicted RBP12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 MYH6P13533 1939 aa12.89□□□□□ -0.35
SNRNP25-204ENST00000417493 PEX10O60683 326 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 MCCP23508 829 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 NOVP48745 357 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 BMP2KLQ5H9B9 411 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 POTEEQ6S8J3 1075 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 DEFB118Q96PH6 123 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 SLC38A10Q9HBR0 1119 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
SNRNP25-204ENST00000417493 ERICH2A1L162 156 aa12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 SGSM2O43147 1006 aa12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 SART3Q15020 963 aaKnown RBP12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 MAP3K21Q5TCX8 1036 aa12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 ERICH6BQ5W0A0 696 aa12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 RALYLQ86SE5 291 aaKnown RBP12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 TBC1D10CQ8IV04 446 aa12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 CPXCR1Q8N123 301 aa12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 MSL3Q8N5Y2 521 aaKnown RBP12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 KAT14Q9H8E8 782 aa12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 NRBP1Q9UHY1 535 aa12.87□□□□□ -0.35
SNRNP25-204ENST00000417493 KDM4AO75164 1064 aa12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 CACNB2Q08289 660 aaPredicted RBP12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 PRPF38BQ5VTL8 546 aaKnown RBP12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 TMEM47Q9BQJ4 181 aa12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 CRISPLD2Q9H0B8 497 aa12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 INCENPQ9NQS7 918 aa12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 MTMR7Q9Y216 660 aa12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 CEP290O15078 2479 aa12.86□□□□□ -0.35
SNRNP25-204ENST00000417493 NMT2O60551 498 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 CNGA1P29973 690 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 CCL14Q16627 93 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 KCTD1Q719H9 257 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 NECAB2Q7Z6G3 386 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 ANKRD35Q8N283 1001 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 ACAD9Q9H845 621 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 FRMPD3Q5JV73 1810 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 PFASO15067 1338 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 NEDD4P46934 1319 aa12.85□□□□□ -0.35
SNRNP25-204ENST00000417493 B4E1Z4 1266 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 ASPRV1Q53RT3 343 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 IFIT1BQ5T764 474 aaKnown RBP12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 SYDE2Q5VT97 1194 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 RNF20Q5VTR2 975 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 BTNL9Q6UXG8 535 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 PNMA1Q8ND90 353 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 NCOA7Q8NI08 942 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 NPLOC4Q8TAT6 608 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 SHISA4Q96DD7 197 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 MAML3Q96JK9 1138 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 RAVER2Q9HCJ3 691 aaKnown RBP12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 ZSWIM5Q9P217 1185 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 CNPY2Q9Y2B0 182 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 NR2E3Q9Y5X4 410 aa12.84□□□□□ -0.35
SNRNP25-204ENST00000417493 BRCA2P51587 3418 aa12.83□□□□□ -0.36
SNRNP25-204ENST00000417493 PDHBP11177 359 aa12.83□□□□□ -0.36
SNRNP25-204ENST00000417493 TRAF1Q13077 416 aa12.83□□□□□ -0.36
SNRNP25-204ENST00000417493 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
SNRNP25-204ENST00000417493 DPF3Q92784 378 aa12.83□□□□□ -0.36
SNRNP25-204ENST00000417493 MAP4K1Q92918 833 aa12.83□□□□□ -0.36
SNRNP25-204ENST00000417493 MPHOSPH6Q99547 160 aaKnown RBP12.83□□□□□ -0.36
SNRNP25-204ENST00000417493 TINF2Q9BSI4 451 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms