RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 B4GALNT3Q6L9W6 998 aa30.05■■■□□ 2.4
VEGFA-208ENST00000417285 FOXP2O15409 715 aa30.04■■■□□ 2.4
VEGFA-208ENST00000417285 MCMDC2Q4G0Z9 681 aa30.04■■■□□ 2.4
VEGFA-208ENST00000417285 MSL3Q8N5Y2 521 aaKnown RBP30.04■■■□□ 2.4
VEGFA-208ENST00000417285 KIFC2Q96AC6 838 aa30.04■■■□□ 2.4
VEGFA-208ENST00000417285 DDX11Q96FC9 970 aa30.04■■■□□ 2.4
VEGFA-208ENST00000417285 SLC38A10Q9HBR0 1119 aa30.04■■■□□ 2.4
VEGFA-208ENST00000417285 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.04■■■□□ 2.42e-6■□□□□ 9
VEGFA-208ENST00000417285 DNAH12Q6ZR08 3092 aa30.04■■■□□ 2.4
VEGFA-208ENST00000417285 OAZ1P54368 228 aa30.03■■■□□ 2.4
VEGFA-208ENST00000417285 LRRC47Q8N1G4 583 aaKnown RBP30.03■■■□□ 2.4
VEGFA-208ENST00000417285 CHURC1Q8WUH1 139 aa30.03■■■□□ 2.4
VEGFA-208ENST00000417285 GMCL1Q96IK5 515 aa30.03■■■□□ 2.4
VEGFA-208ENST00000417285 SUPT16HQ9Y5B9 1047 aaKnown RBP30.03■■■□□ 2.4
VEGFA-208ENST00000417285 PARP14Q460N5 1801 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 TSPY2A6NKD2 308 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 KBTBD13C9JR72 458 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 IGHDP01880 384 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 SYN1P17600 705 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 CTDSPL2Q05D32 466 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 CHD1LQ86WJ1 897 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 CPXCR1Q8N123 301 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 FBXO40Q9UH90 709 aa30.02■■■□□ 2.4
VEGFA-208ENST00000417285 GJC2Q5T442 439 aaPredicted RBP30.01■■■□□ 2.39
VEGFA-208ENST00000417285 VPS53Q5VIR6 699 aa30.01■■■□□ 2.39
VEGFA-208ENST00000417285 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.01■■■□□ 2.395e-6■□□□□ 9.9
VEGFA-208ENST00000417285 RIPK3Q9Y572 518 aa30.01■■■□□ 2.39
VEGFA-208ENST00000417285 TRIM6-TRIM34B2RNG4 842 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 ORC4O43929 436 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 FGRP09769 529 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 MAGEA10P43363 369 aaPredicted RBP30■■■□□ 2.39
VEGFA-208ENST00000417285 NUCB1Q02818 461 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 FAM160B2Q86V87 743 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 CHST13Q8NET6 341 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 STX8Q9UNK0 236 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 CNPY2Q9Y2B0 182 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 ALPK3Q96L96 1907 aa30■■■□□ 2.39
VEGFA-208ENST00000417285 TMEM232C9JQI7 657 aa29.99■■■□□ 2.39
VEGFA-208ENST00000417285 RANBP6O60518 1105 aaKnown RBP29.99■■■□□ 2.39
VEGFA-208ENST00000417285 PLA2G6O60733 806 aa29.99■■■□□ 2.39
VEGFA-208ENST00000417285 SLC1A4P43007 532 aa29.99■■■□□ 2.39
VEGFA-208ENST00000417285 SLC4A3P48751 1232 aa29.99■■■□□ 2.39
VEGFA-208ENST00000417285 STAT2P52630 851 aa29.99■■■□□ 2.39
VEGFA-208ENST00000417285 ANO1Q5XXA6 986 aa29.99■■■□□ 2.39
VEGFA-208ENST00000417285 STAG1Q8WVM7 1258 aa29.99■■■□□ 2.39
VEGFA-208ENST00000417285 FAM227BQ96M60 508 aa29.99■■■□□ 2.39
VEGFA-208ENST00000417285 RAVER2Q9HCJ3 691 aaKnown RBP29.99■■■□□ 2.39
VEGFA-208ENST00000417285 DNAJC25-GNG10A0A024R161 153 aa29.98■■■□□ 2.39
VEGFA-208ENST00000417285 FGAP02671 866 aa29.98■■■□□ 2.39
VEGFA-208ENST00000417285 RARBP10826 455 aa29.98■■■□□ 2.39
VEGFA-208ENST00000417285 INCENPQ9NQS7 918 aa29.98■■■□□ 2.39
VEGFA-208ENST00000417285 IL17RBQ9NRM6 502 aa29.98■■■□□ 2.39
VEGFA-208ENST00000417285 MCCP23508 829 aa29.97■■■□□ 2.39
VEGFA-208ENST00000417285 ATN1P54259 1190 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-208ENST00000417285 MFAP1P55081 439 aaKnown RBP29.97■■■□□ 2.39
VEGFA-208ENST00000417285 RCSD1Q6JBY9 416 aa29.97■■■□□ 2.39
VEGFA-208ENST00000417285 MAMDC4Q6UXC1 1216 aa29.97■■■□□ 2.39
VEGFA-208ENST00000417285 ZNF467Q7Z7K2 595 aaPredicted RBP29.97■■■□□ 2.39
VEGFA-208ENST00000417285 ANKRD35Q8N283 1001 aa29.97■■■□□ 2.39
VEGFA-208ENST00000417285 RILPL2Q969X0 211 aa29.97■■■□□ 2.39
VEGFA-208ENST00000417285 OSBPL3Q9H4L5 887 aa29.97■■■□□ 2.39
VEGFA-208ENST00000417285 ISY1Q9ULR0 285 aaKnown RBP29.97■■■□□ 2.39
VEGFA-208ENST00000417285 SYNGAP1Q96PV0 1343 aa29.96■■■□□ 2.39
VEGFA-208ENST00000417285 COL11A1P12107 1806 aaPredicted RBP29.96■■■□□ 2.39
VEGFA-208ENST00000417285 ZNFX1Q9P2E3 1918 aaKnown RBP29.96■■■□□ 2.39
VEGFA-208ENST00000417285 A0A0D9SFI3 127 aa29.96■■■□□ 2.39
VEGFA-208ENST00000417285 LRRC41Q15345 812 aa29.96■■■□□ 2.39
VEGFA-208ENST00000417285 UBE2OQ9C0C9 1292 aaKnown RBP29.96■■■□□ 2.39
VEGFA-208ENST00000417285 MYCNP04198 464 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-208ENST00000417285 ZNF865P0CJ78 1059 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-208ENST00000417285 HSPD1P10809 573 aaKnown RBP29.95■■■□□ 2.39
VEGFA-208ENST00000417285 AKR1A1P14550 325 aa29.95■■■□□ 2.39
VEGFA-208ENST00000417285 NOVP48745 357 aa29.95■■■□□ 2.39
VEGFA-208ENST00000417285 IKQ13123 557 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-208ENST00000417285 NMIQ13287 307 aaPredicted RBP29.95■■■□□ 2.39
VEGFA-208ENST00000417285 SLC39A5Q6ZMH5 540 aa29.95■■■□□ 2.39
VEGFA-208ENST00000417285 PLEKHM2Q8IWE5 1019 aa29.95■■■□□ 2.39
VEGFA-208ENST00000417285 XPNPEP3Q9NQH7 507 aa29.95■■■□□ 2.39
VEGFA-208ENST00000417285 ZMYM6O95789 1325 aa29.95■■■□□ 2.38
VEGFA-208ENST00000417285 RNF180Q86T96 592 aa29.94■■■□□ 2.38
VEGFA-208ENST00000417285 PRKAG2Q9UGJ0 569 aa29.94■■■□□ 2.38
VEGFA-208ENST00000417285 MYH4Q9Y623 1939 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 NMT2O60551 498 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 PCP11498 1178 aaKnown RBP29.93■■■□□ 2.38
VEGFA-208ENST00000417285 TAL1P17542 331 aaPredicted RBP29.93■■■□□ 2.38
VEGFA-208ENST00000417285 ADCYAP1R1P41586 468 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 RTP1P59025 263 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 TKFCQ3LXA3 575 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 TDHQ8IZJ6 230 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 TOMM22Q9NS69 142 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 TCP11L1Q9NUJ3 509 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 FAM184BQ9ULE4 1060 aa29.93■■■□□ 2.38
VEGFA-208ENST00000417285 SDSP20132 328 aa29.92■■■□□ 2.38
VEGFA-208ENST00000417285 LBHD1Q9BQE6 289 aaPredicted RBP29.92■■■□□ 2.38
VEGFA-208ENST00000417285 TACC3Q9Y6A5 838 aa29.92■■■□□ 2.38
VEGFA-208ENST00000417285 CCDC171Q6TFL3 1326 aa29.92■■■□□ 2.38
VEGFA-208ENST00000417285 SZT2Q5T011 3432 aa29.92■■■□□ 2.38
VEGFA-208ENST00000417285 SNAI1O95863 264 aaPredicted RBP29.91■■■□□ 2.38
VEGFA-208ENST00000417285 LRIT3Q3SXY7 679 aa29.91■■■□□ 2.38
VEGFA-208ENST00000417285 C1orf53Q5VUE5 145 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms