RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 FOXP2O15409 715 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 PGK1P00558 417 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 ZNF865P0CJ78 1059 aaPredicted RBP18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 TSPY3P0CV98 308 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 TSPY8P0CW00 308 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 TFAP4Q01664 338 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 PPARAQ07869 468 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 LRRFIP1Q32MZ4 808 aaKnown RBP18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 TRIM60Q495X7 471 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 ANKRD45Q5TZF3 282 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 DEFB123Q8N688 67 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 LBHD1Q9BQE6 289 aaPredicted RBP18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 TEX13BQ9BXU2 312 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 NACAP1Q9BZK3 213 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 NAPBQ9H115 298 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 ZNF287Q9HBT7 754 aa18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 DIS3Q9Y2L1 958 aaKnown RBP18.58■□□□□ 0.56
RHBDF1-202ENST00000417043 SALL3Q9BXA9 1300 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 ZBED4O75132 1171 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 TTLL1O95922 423 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 CTDSPL2Q05D32 466 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 SH3RF1Q7Z6J0 888 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 NEDD1Q8NHV4 660 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 XPNPEP3Q9NQH7 507 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 PRDM5Q9NQX1 630 aaPredicted RBP18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 PRKAG2Q9UGJ0 569 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 MCM3APO60318 1980 aa18.57■□□□□ 0.56
RHBDF1-202ENST00000417043 A0A0C4DFX4 3053 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 SNAI1O95863 264 aaPredicted RBP18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 RARBP10826 455 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 COPB2P35606 906 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 PDE4BQ07343 736 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 SLFN13Q68D06 897 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 DDX11Q96FC9 970 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 NRBP1Q9UHY1 535 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 CTDP1Q9Y5B0 961 aaPredicted RBP18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 TACC3Q9Y6A5 838 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 LTBP2Q14767 1821 aa18.56■□□□□ 0.56
RHBDF1-202ENST00000417043 DNAJC25-GNG10A0A024R161 153 aa18.55■□□□□ 0.56
RHBDF1-202ENST00000417043 VPS53Q5VIR6 699 aa18.55■□□□□ 0.56
RHBDF1-202ENST00000417043 SLC38A10Q9HBR0 1119 aa18.55■□□□□ 0.56
RHBDF1-202ENST00000417043 FEM1BQ9UK73 627 aa18.55■□□□□ 0.56
RHBDF1-202ENST00000417043 ISY1Q9ULR0 285 aaKnown RBP18.55■□□□□ 0.56
RHBDF1-202ENST00000417043 TRIM43BA6NCK2 446 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 ATP2A1O14983 1001 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 NMT2O60551 498 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 SNX17Q15036 470 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 GPR153Q6NV75 609 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 GMCL1P1Q8NEA9 526 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 BADQ92934 168 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 TRIM43Q96BQ3 446 aaPredicted RBP18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 HOMER2Q9NSB8 354 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 PHF24Q9UPV7 400 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 CNPY2Q9Y2B0 182 aa18.54■□□□□ 0.56
RHBDF1-202ENST00000417043 TMEM232C9JQI7 657 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 SLC3A2P08195 630 aaKnown RBP18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 BMP3P12645 472 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 AKR1A1P14550 325 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 MCCP23508 829 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 IRX5P78411 483 aaPredicted RBP18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 TLE2Q04725 743 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 RASGRP2Q7LDG7 609 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 SLC17A8Q8NDX2 589 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 FGD4Q96M96 766 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 PDLIM7Q9NR12 457 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 IL17RBQ9NRM6 502 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 ZHX1Q9UKY1 873 aaPredicted RBP18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 PLIN4Q96Q06 1357 aa18.53■□□□□ 0.56
RHBDF1-202ENST00000417043 ADAMTS4O75173 837 aa18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 ITGB8P26012 769 aa18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 SNAP25P60880 206 aa18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 SHHQ15465 462 aa18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 MAMDC4Q6UXC1 1216 aa18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 RNF180Q86T96 592 aa18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 ANKRD35Q8N283 1001 aa18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 MTMR10Q9NXD2 777 aa18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 ZBTB47Q9UFB7 747 aaPredicted RBP18.52■□□□□ 0.56
RHBDF1-202ENST00000417043 A0A1W2PQ45 241 aaPredicted RBP18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 A0A1W2PQY0 241 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 MYADML2A6NDP7 307 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 ADCY6O43306 1168 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 PDE1AP54750 535 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 C9orf50Q5SZB4 431 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 KCTD1Q719H9 257 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 EVI5LQ96CN4 794 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 AGBL1Q96MI9 1066 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 FAM184BQ9ULE4 1060 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 SYNPO2Q9UMS6 1093 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 STX8Q9UNK0 236 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 MTMR7Q9Y216 660 aa18.51■□□□□ 0.55
RHBDF1-202ENST00000417043 SYNGAP1Q96PV0 1343 aa18.5■□□□□ 0.55
RHBDF1-202ENST00000417043 SYNRGQ9UMZ2 1314 aa18.5■□□□□ 0.55
RHBDF1-202ENST00000417043 TSPY2A6NKD2 308 aa18.5■□□□□ 0.55
RHBDF1-202ENST00000417043 RANBP6O60518 1105 aaKnown RBP18.5■□□□□ 0.55
RHBDF1-202ENST00000417043 SLC1A4P43007 532 aa18.5■□□□□ 0.55
RHBDF1-202ENST00000417043 CNTN2Q02246 1040 aa18.5■□□□□ 0.55
RHBDF1-202ENST00000417043 IKQ13123 557 aaPredicted RBP18.5■□□□□ 0.55
RHBDF1-202ENST00000417043 C1orf53Q5VUE5 145 aa18.5■□□□□ 0.55
RHBDF1-202ENST00000417043 MSL3Q8N5Y2 521 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms