RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 GMCL1P1Q8NEA9 526 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 IL17RBQ9NRM6 502 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
UBXN4-203ENST00000416538 ZMYND8Q9ULU4 1186 aaPredicted RBP17.97■□□□□ 0.47
UBXN4-203ENST00000416538 NR2E3Q9Y5X4 410 aa17.97■□□□□ 0.47
UBXN4-203ENST00000416538 LAMA3Q16787 3333 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 SLC25A27O95847 323 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 TSPY3P0CV98 308 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 TSPY8P0CW00 308 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 STAT3P40763 770 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 NUCB1Q02818 461 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 PDE4BQ07343 736 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 LRRC26Q2I0M4 334 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 CHD1LQ86WJ1 897 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 CHMP4CQ96CF2 233 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 MMP19Q99542 508 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 HELLSQ9NRZ9 838 aa17.96■□□□□ 0.47
UBXN4-203ENST00000416538 ATXN8OSP0DMR3 200 aa17.95■□□□□ 0.46
UBXN4-203ENST00000416538 FCER1AP12319 257 aa17.95■□□□□ 0.46
UBXN4-203ENST00000416538 CNGA1P29973 690 aa17.95■□□□□ 0.46
UBXN4-203ENST00000416538 SNRNP48Q6IEG0 339 aaKnown RBP17.95■□□□□ 0.46
UBXN4-203ENST00000416538 ZNF287Q9HBT7 754 aa17.95■□□□□ 0.46
UBXN4-203ENST00000416538 ANAPC4Q9UJX5 808 aa17.95■□□□□ 0.46
UBXN4-203ENST00000416538 FGRP09769 529 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 SYN1P17600 705 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 ALX1Q15699 326 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 ZNF792Q3KQV3 632 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 SLFN13Q68D06 897 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 KIFC2Q96AC6 838 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 TEX13BQ9BXU2 312 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
UBXN4-203ENST00000416538 SLC38A10Q9HBR0 1119 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 SYNPO2Q9UMS6 1093 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
UBXN4-203ENST00000416538 DNAH12Q6ZR08 3092 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 ZMYM6O95789 1325 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 CCDC171Q6TFL3 1326 aa17.94■□□□□ 0.46
UBXN4-203ENST00000416538 ATP2A1O14983 1001 aa17.93■□□□□ 0.46
UBXN4-203ENST00000416538 ORC4O43929 436 aa17.93■□□□□ 0.46
UBXN4-203ENST00000416538 FGAP02671 866 aa17.93■□□□□ 0.46
UBXN4-203ENST00000416538 HSPD1P10809 573 aaKnown RBP17.93■□□□□ 0.46
UBXN4-203ENST00000416538 TAL1P17542 331 aaPredicted RBP17.93■□□□□ 0.46
UBXN4-203ENST00000416538 MCMDC2Q4G0Z9 681 aa17.93■□□□□ 0.46
UBXN4-203ENST00000416538 TBC1D10CQ8IV04 446 aa17.93■□□□□ 0.46
UBXN4-203ENST00000416538 CPXCR1Q8N123 301 aa17.93■□□□□ 0.46
UBXN4-203ENST00000416538 PRPF38AQ8NAV1 312 aaKnown RBP17.93■□□□□ 0.46
UBXN4-203ENST00000416538 LENG1Q96BZ8 264 aaPredicted RBP17.93■□□□□ 0.46
UBXN4-203ENST00000416538 FGD4Q96M96 766 aa17.93■□□□□ 0.46
UBXN4-203ENST00000416538 OSBPL3Q9H4L5 887 aa17.93■□□□□ 0.46
UBXN4-203ENST00000416538 RAVER2Q9HCJ3 691 aaKnown RBP17.93■□□□□ 0.46
UBXN4-203ENST00000416538 DNAJC25-GNG10A0A024R161 153 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 TRIM6-TRIM34B2RNG4 842 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 SEPT4O43236 478 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 SLC3A2P08195 630 aaKnown RBP17.92■□□□□ 0.46
UBXN4-203ENST00000416538 BMP3P12645 472 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 NOVP48745 357 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 HAND2P61296 217 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 KCTD2Q14681 263 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 RILPL2Q969X0 211 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 GDF15Q99988 308 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 ZNF536O15090 1300 aa17.92■□□□□ 0.46
UBXN4-203ENST00000416538 TSPY2A6NKD2 308 aa17.91■□□□□ 0.46
UBXN4-203ENST00000416538 MSCO60682 206 aa17.91■□□□□ 0.46
UBXN4-203ENST00000416538 PDE4AP27815 886 aa17.91■□□□□ 0.46
UBXN4-203ENST00000416538 GJC2Q5T442 439 aaPredicted RBP17.91■□□□□ 0.46
UBXN4-203ENST00000416538 GMCL1Q96IK5 515 aa17.91■□□□□ 0.46
UBXN4-203ENST00000416538 IL25Q9H293 177 aa17.91■□□□□ 0.46
UBXN4-203ENST00000416538 FEM1BQ9UK73 627 aa17.91■□□□□ 0.46
UBXN4-203ENST00000416538 STX8Q9UNK0 236 aa17.91■□□□□ 0.46
UBXN4-203ENST00000416538 MYH6P13533 1939 aa17.9■□□□□ 0.46
UBXN4-203ENST00000416538 TMEM232C9JQI7 657 aa17.9■□□□□ 0.46
UBXN4-203ENST00000416538 DNM1LO00429 736 aa17.9■□□□□ 0.46
UBXN4-203ENST00000416538 SOX1O00570 391 aaPredicted RBP17.9■□□□□ 0.46
UBXN4-203ENST00000416538 RANBP6O60518 1105 aaKnown RBP17.9■□□□□ 0.46
UBXN4-203ENST00000416538 SDSP20132 328 aa17.9■□□□□ 0.46
UBXN4-203ENST00000416538 MCCP23508 829 aa17.9■□□□□ 0.46
UBXN4-203ENST00000416538 COPB2P35606 906 aa17.9■□□□□ 0.46
UBXN4-203ENST00000416538 IRX6P78412 446 aaPredicted RBP17.9■□□□□ 0.46
UBXN4-203ENST00000416538 KCTD1Q719H9 257 aa17.9■□□□□ 0.46
UBXN4-203ENST00000416538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.9■□□□□ 0.46
UBXN4-203ENST00000416538 TINF2Q9BSI4 451 aa17.9■□□□□ 0.46
UBXN4-203ENST00000416538 ZNF865P0CJ78 1059 aaPredicted RBP17.89■□□□□ 0.45
UBXN4-203ENST00000416538 MAGEA10P43363 369 aaPredicted RBP17.89■□□□□ 0.45
UBXN4-203ENST00000416538 SLC4A3P48751 1232 aa17.89■□□□□ 0.45
UBXN4-203ENST00000416538 ATN1P54259 1190 aaPredicted RBP17.89■□□□□ 0.45
UBXN4-203ENST00000416538 SNAP25P60880 206 aa17.89■□□□□ 0.45
UBXN4-203ENST00000416538 SENP6Q9GZR1 1112 aaPredicted RBP17.89■□□□□ 0.45
UBXN4-203ENST00000416538 SLC5A4Q9NY91 659 aa17.89■□□□□ 0.45
UBXN4-203ENST00000416538 MTMR7Q9Y216 660 aa17.89■□□□□ 0.45
UBXN4-203ENST00000416538 DIS3Q9Y2L1 958 aaKnown RBP17.89■□□□□ 0.45
UBXN4-203ENST00000416538 NEDD4P46934 1319 aa17.89■□□□□ 0.45
UBXN4-203ENST00000416538 ADCY6O43306 1168 aa17.88■□□□□ 0.45
UBXN4-203ENST00000416538 SLC1A4P43007 532 aa17.88■□□□□ 0.45
UBXN4-203ENST00000416538 STAT2P52630 851 aa17.88■□□□□ 0.45
UBXN4-203ENST00000416538 RRP12Q5JTH9 1297 aaKnown RBP17.88■□□□□ 0.45
UBXN4-203ENST00000416538 TICAM2Q86XR7 235 aa17.88■□□□□ 0.45
UBXN4-203ENST00000416538 HOMER2Q9NSB8 354 aa17.88■□□□□ 0.45
UBXN4-203ENST00000416538 ISY1Q9ULR0 285 aaKnown RBP17.88■□□□□ 0.45
UBXN4-203ENST00000416538 ZBED4O75132 1171 aa17.87■□□□□ 0.45
UBXN4-203ENST00000416538 SNAI1O95863 264 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms