RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PRAMEF19Q5SWL8 479 aa20.87■□□□□ 0.93
PDLIM2-208ENST00000416159 KIFC2Q96AC6 838 aa20.87■□□□□ 0.93
PDLIM2-208ENST00000416159 GDF15Q99988 308 aa20.87■□□□□ 0.93
PDLIM2-208ENST00000416159 SENP6Q9GZR1 1112 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-208ENST00000416159 ANAPC4Q9UJX5 808 aa20.87■□□□□ 0.93
PDLIM2-208ENST00000416159 TSPY2A6NKD2 308 aa20.86■□□□□ 0.93
PDLIM2-208ENST00000416159 FDX1P10109 184 aa20.86■□□□□ 0.93
PDLIM2-208ENST00000416159 BMP3P12645 472 aa20.86■□□□□ 0.93
PDLIM2-208ENST00000416159 BMP8BP34820 402 aa20.86■□□□□ 0.93
PDLIM2-208ENST00000416159 LRRC26Q2I0M4 334 aa20.86■□□□□ 0.93
PDLIM2-208ENST00000416159 VPS53Q5VIR6 699 aa20.86■□□□□ 0.93
PDLIM2-208ENST00000416159 CPXCR1Q8N123 301 aa20.86■□□□□ 0.93
PDLIM2-208ENST00000416159 TINF2Q9BSI4 451 aa20.86■□□□□ 0.93
PDLIM2-208ENST00000416159 TRIM6-TRIM34B2RNG4 842 aa20.85■□□□□ 0.93
PDLIM2-208ENST00000416159 SYN1P17600 705 aa20.85■□□□□ 0.93
PDLIM2-208ENST00000416159 B4GALNT3Q6L9W6 998 aa20.85■□□□□ 0.93
PDLIM2-208ENST00000416159 DDX11Q96FC9 970 aa20.85■□□□□ 0.93
PDLIM2-208ENST00000416159 SLC38A10Q9HBR0 1119 aa20.85■□□□□ 0.93
PDLIM2-208ENST00000416159 RIPK3Q9Y572 518 aa20.85■□□□□ 0.93
PDLIM2-208ENST00000416159 PLXNA1Q9UIW2 1896 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 SMCHD1A6NHR9 2005 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 A0A0D9SFI3 127 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 ORC4O43929 436 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 OAZ1P54368 228 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 GJC2Q5T442 439 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 ANO1Q5XXA6 986 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 FAM160B2Q86V87 743 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 CHD1LQ86WJ1 897 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 MSL3Q8N5Y2 521 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 EXOC6Q8TAG9 804 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 CHURC1Q8WUH1 139 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 RILPL2Q969X0 211 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 GMCL1Q96IK5 515 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 FAM227BQ96M60 508 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 RAVER2Q9HCJ3 691 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 INCENPQ9NQS7 918 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 FBXO40Q9UH90 709 aa20.84■□□□□ 0.93
PDLIM2-208ENST00000416159 TMEM232C9JQI7 657 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 KBTBD13C9JR72 458 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 RANBP6O60518 1105 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 IGHDP01880 384 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 FGAP02671 866 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 FGRP09769 529 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 SLC1A4P43007 532 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 SLC4A3P48751 1232 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 CHST13Q8NET6 341 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 ISY1Q9ULR0 285 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 STX8Q9UNK0 236 aa20.83■□□□□ 0.93
PDLIM2-208ENST00000416159 PLA2G6O60733 806 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 HSPD1P10809 573 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 STAT2P52630 851 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 NUCB1Q02818 461 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 NMIQ13287 307 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 PLEKHM2Q8IWE5 1019 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 STAG1Q8WVM7 1258 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 OSBPL3Q9H4L5 887 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 IL17RBQ9NRM6 502 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 CNPY2Q9Y2B0 182 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 TACC3Q9Y6A5 838 aa20.82■□□□□ 0.92
PDLIM2-208ENST00000416159 DNAJC25-GNG10A0A024R161 153 aa20.81■□□□□ 0.92
PDLIM2-208ENST00000416159 RARBP10826 455 aa20.81■□□□□ 0.92
PDLIM2-208ENST00000416159 MCCP23508 829 aa20.81■□□□□ 0.92
PDLIM2-208ENST00000416159 MAGEA10P43363 369 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-208ENST00000416159 RCSD1Q6JBY9 416 aa20.81■□□□□ 0.92
PDLIM2-208ENST00000416159 ZMYM6O95789 1325 aa20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 CCDC171Q6TFL3 1326 aa20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 MYCNP04198 464 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 ZNF865P0CJ78 1059 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 SDSP20132 328 aa20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 NOVP48745 357 aa20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 ATN1P54259 1190 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 MFAP1P55081 439 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 IKQ13123 557 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 LRRC41Q15345 812 aa20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 MAMDC4Q6UXC1 1216 aa20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 ZNF467Q7Z7K2 595 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 ANKRD35Q8N283 1001 aa20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 TOMM22Q9NS69 142 aa20.8■□□□□ 0.92
PDLIM2-208ENST00000416159 SYNGAP1Q96PV0 1343 aa20.79■□□□□ 0.92
PDLIM2-208ENST00000416159 NMT2O60551 498 aa20.79■□□□□ 0.92
PDLIM2-208ENST00000416159 AKR1A1P14550 325 aa20.79■□□□□ 0.92
PDLIM2-208ENST00000416159 TAL1P17542 331 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-208ENST00000416159 RTP1P59025 263 aa20.79■□□□□ 0.92
PDLIM2-208ENST00000416159 SLC39A5Q6ZMH5 540 aa20.79■□□□□ 0.92
PDLIM2-208ENST00000416159 ZNF589Q86UQ0 364 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-208ENST00000416159 XPNPEP3Q9NQH7 507 aa20.79■□□□□ 0.92
PDLIM2-208ENST00000416159 PCP11498 1178 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-208ENST00000416159 TKFCQ3LXA3 575 aa20.78■□□□□ 0.92
PDLIM2-208ENST00000416159 RRP12Q5JTH9 1297 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-208ENST00000416159 KCTD1Q719H9 257 aa20.78■□□□□ 0.92
PDLIM2-208ENST00000416159 UBE2OQ9C0C9 1292 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-208ENST00000416159 TCP11L1Q9NUJ3 509 aa20.78■□□□□ 0.92
PDLIM2-208ENST00000416159 SNAI1O95863 264 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-208ENST00000416159 ADCYAP1R1P41586 468 aa20.77■□□□□ 0.92
PDLIM2-208ENST00000416159 RNF180Q86T96 592 aa20.77■□□□□ 0.92
PDLIM2-208ENST00000416159 DCAF4Q8WV16 495 aa20.77■□□□□ 0.92
PDLIM2-208ENST00000416159 CHMP4CQ96CF2 233 aa20.77■□□□□ 0.92
PDLIM2-208ENST00000416159 ACAD9Q9H845 621 aa20.77■□□□□ 0.92
PDLIM2-208ENST00000416159 PRKAG2Q9UGJ0 569 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms