RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 SNRNP48Q6IEG0 339 aaKnown RBP29.15■■■□□ 2.26
AC005540.1-201ENST00000413911 CLIP2Q9UDT6 1046 aa29.15■■■□□ 2.26
AC005540.1-201ENST00000413911 FAM161BQ96MY7 647 aa29.14■■■□□ 2.26
AC005540.1-201ENST00000413911 TEX13BQ9BXU2 312 aa29.14■■■□□ 2.26
AC005540.1-201ENST00000413911 SNAI1O95863 264 aaPredicted RBP29.13■■■□□ 2.25
AC005540.1-201ENST00000413911 COPB2P35606 906 aa29.13■■■□□ 2.25
AC005540.1-201ENST00000413911 SEC62Q99442 399 aaKnown RBP29.13■■■□□ 2.25
AC005540.1-201ENST00000413911 CUL9Q8IWT3 2517 aa29.13■■■□□ 2.25
AC005540.1-201ENST00000413911 DNAJC25-GNG10A0A024R161 153 aa29.12■■■□□ 2.25
AC005540.1-201ENST00000413911 ADAMTS4O75173 837 aa29.12■■■□□ 2.25
AC005540.1-201ENST00000413911 PRPF38AQ8NAV1 312 aaKnown RBP29.12■■■□□ 2.25
AC005540.1-201ENST00000413911 MKL1Q969V6 931 aa29.12■■■□□ 2.25
AC005540.1-201ENST00000413911 CEP95Q96GE4 821 aa29.12■■■□□ 2.25
AC005540.1-201ENST00000413911 EYSQ5T1H1 3165 aa29.12■■■□□ 2.25
AC005540.1-201ENST00000413911 AKR1A1P14550 325 aa29.11■■■□□ 2.25
AC005540.1-201ENST00000413911 TDO2P48775 406 aa29.11■■■□□ 2.25
AC005540.1-201ENST00000413911 CPXCR1Q8N123 301 aa29.11■■■□□ 2.25
AC005540.1-201ENST00000413911 OTUD7AQ8TE49 926 aaPredicted RBP29.11■■■□□ 2.25
AC005540.1-201ENST00000413911 GPATCH3Q96I76 525 aa29.11■■■□□ 2.25
AC005540.1-201ENST00000413911 MTMR4Q9NYA4 1195 aa29.11■■■□□ 2.25
AC005540.1-201ENST00000413911 MYH4Q9Y623 1939 aa29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 A0A1W2PQ45 241 aaPredicted RBP29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 A0A1W2PQY0 241 aa29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 ATP2A1O14983 1001 aa29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 ZFYP08048 801 aaPredicted RBP29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 SLC4A3P48751 1232 aa29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 RNF180Q86T96 592 aa29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 IFNL3Q8IZI9 196 aa29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 FGD4Q96M96 766 aa29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 RAVER2Q9HCJ3 691 aaKnown RBP29.1■■■□□ 2.25
AC005540.1-201ENST00000413911 CDH23Q9H251 3354 aa29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 PATL2C9JE40 543 aaKnown RBP29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 APPP05067 770 aa29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 GNAT2P19087 354 aa29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 IRX5P78411 483 aaPredicted RBP29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 MAMDC4Q6UXC1 1216 aa29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 ZNF444Q8N0Y2 327 aaPredicted RBP29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 LRRC47Q8N1G4 583 aaKnown RBP29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 PI4K2BQ8TCG2 481 aa29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 KIFC2Q96AC6 838 aa29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 CNPY2Q9Y2B0 182 aa29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 PCDHB15Q9Y5E8 787 aa29.09■■■□□ 2.25
AC005540.1-201ENST00000413911 EPHB4P54760 987 aa29.08■■■□□ 2.25
AC005540.1-201ENST00000413911 DDX11Q96FC9 970 aa29.08■■■□□ 2.25
AC005540.1-201ENST00000413911 SLC38A10Q9HBR0 1119 aa29.08■■■□□ 2.25
AC005540.1-201ENST00000413911 SYNRGQ9UMZ2 1314 aa29.08■■■□□ 2.25
AC005540.1-201ENST00000413911 ADCY6O43306 1168 aa29.07■■■□□ 2.24
AC005540.1-201ENST00000413911 MSL3Q8N5Y2 521 aaKnown RBP29.07■■■□□ 2.24
AC005540.1-201ENST00000413911 KLHDC9Q8NEP7 349 aa29.07■■■□□ 2.24
AC005540.1-201ENST00000413911 SYNGAP1Q96PV0 1343 aa29.07■■■□□ 2.24
AC005540.1-201ENST00000413911 TACC3Q9Y6A5 838 aa29.07■■■□□ 2.24
AC005540.1-201ENST00000413911 MYADML2A6NDP7 307 aa29.06■■■□□ 2.24
AC005540.1-201ENST00000413911 PQBP1O60828 265 aaKnown RBP29.06■■■□□ 2.24
AC005540.1-201ENST00000413911 ZBED4O75132 1171 aa29.06■■■□□ 2.24
AC005540.1-201ENST00000413911 CLTBP09497 229 aa29.06■■■□□ 2.24
AC005540.1-201ENST00000413911 CCSAPQ6IQ19 270 aaPredicted RBP29.06■■■□□ 2.24
AC005540.1-201ENST00000413911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.06■■■□□ 2.24
AC005540.1-201ENST00000413911 PLIN4Q96Q06 1357 aa29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 KIAA0355O15063 1070 aa29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 TTLL1O95922 423 aa29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 ACLYP53396 1101 aa29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 GMCL1P1Q8NEA9 526 aa29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 NEDD1Q8NHV4 660 aa29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 FEM1BQ9UK73 627 aa29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 ZHX1Q9UKY1 873 aaPredicted RBP29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 FAM184BQ9ULE4 1060 aa29.05■■■□□ 2.24
AC005540.1-201ENST00000413911 TTC41PQ6P2S7 1318 aa29.04■■■□□ 2.24
AC005540.1-201ENST00000413911 ZNF697Q5TEC3 545 aa29.04■■■□□ 2.24
AC005540.1-201ENST00000413911 SLFN13Q68D06 897 aa29.04■■■□□ 2.24
AC005540.1-201ENST00000413911 TSEN34Q9BSV6 310 aaKnown RBP29.04■■■□□ 2.24
AC005540.1-201ENST00000413911 FOXP2O15409 715 aa29.03■■■□□ 2.24
AC005540.1-201ENST00000413911 FAAP100Q0VG06 881 aa29.03■■■□□ 2.24
AC005540.1-201ENST00000413911 KCNA10Q16322 511 aa29.03■■■□□ 2.24
AC005540.1-201ENST00000413911 ZMYM1Q5SVZ6 1142 aa29.03■■■□□ 2.24
AC005540.1-201ENST00000413911 ZNF467Q7Z7K2 595 aaPredicted RBP29.03■■■□□ 2.24
AC005540.1-201ENST00000413911 ZNF287Q9HBT7 754 aa29.03■■■□□ 2.24
AC005540.1-201ENST00000413911 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.03■■■□□ 2.24
AC005540.1-201ENST00000413911 SYNPO2Q9UMS6 1093 aa29.03■■■□□ 2.24
AC005540.1-201ENST00000413911 TFAP4Q01664 338 aa29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 ACVR2BQ13705 512 aa29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 ANKRD33Q7Z3H0 272 aa29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 CHMP4CQ96CF2 233 aa29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 CDX2Q99626 313 aaPredicted RBP29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 TTYH1Q9H313 450 aaPredicted RBP29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 SEMA6BQ9H3T3 888 aa29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 INCENPQ9NQS7 918 aa29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 MCM3APO60318 1980 aa29.02■■■□□ 2.24
AC005540.1-201ENST00000413911 DUSP11O75319 330 aaKnown RBP29.01■■■□□ 2.23
AC005540.1-201ENST00000413911 TSPY3P0CV98 308 aa29.01■■■□□ 2.23
AC005540.1-201ENST00000413911 TSPY8P0CW00 308 aa29.01■■■□□ 2.23
AC005540.1-201ENST00000413911 BMP3P12645 472 aa29.01■■■□□ 2.23
AC005540.1-201ENST00000413911 PPARAQ07869 468 aa29.01■■■□□ 2.23
AC005540.1-201ENST00000413911 ANKRD35Q8N283 1001 aa29.01■■■□□ 2.23
AC005540.1-201ENST00000413911 STARD7Q9NQZ5 370 aa29.01■■■□□ 2.23
AC005540.1-201ENST00000413911 CTDP1Q9Y5B0 961 aaPredicted RBP29.01■■■□□ 2.23
AC005540.1-201ENST00000413911 TMEM232C9JQI7 657 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 OAZ1P54368 228 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 SMAD3P84022 425 aaKnown RBP29■■■□□ 2.23
AC005540.1-201ENST00000413911 CNTN2Q02246 1040 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 CCDC129Q6ZRS4 1044 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms