RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SBK1Q52WX2 424 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 AMOTL1Q8IY63 956 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 NUP88Q99567 741 aaPredicted RBP14.61□□□□□ -0.07
LIMS2-210ENST00000413578 SLF1Q9BQI6 1058 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 NYAP2Q9P242 653 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 TBX21Q9UL17 535 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 CNPY2Q9Y2B0 182 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 RIPK3Q9Y572 518 aa14.61□□□□□ -0.07
LIMS2-210ENST00000413578 MOXD2PA6NHM9 499 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 MS4A1P11836 297 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 RAG1P15918 1043 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 ACLYP53396 1101 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 FPGSQ05932 587 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 ZNF467Q7Z7K2 595 aaPredicted RBP14.6□□□□□ -0.07
LIMS2-210ENST00000413578 DDRGK1Q96HY6 314 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 FGD4Q96M96 766 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 STRBPQ96SI9 672 aaKnown RBP14.6□□□□□ -0.07
LIMS2-210ENST00000413578 COG6Q9Y2V7 657 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 MUC3AQ02505 3323 aa14.6□□□□□ -0.07
LIMS2-210ENST00000413578 SMCHD1A6NHR9 2005 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 BAZ2AQ9UIF9 1905 aaKnown RBP14.59□□□□□ -0.07
LIMS2-210ENST00000413578 MYADML2A6NDP7 307 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 GSG1L2A8MUP6 293 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 F5H6K3 240 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 ADCY6O43306 1168 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 NDUFB10O96000 172 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 FOSL2P15408 326 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 CDK7P50613 346 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 KLRC3Q07444 240 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 SNRNP48Q6IEG0 339 aaKnown RBP14.59□□□□□ -0.07
LIMS2-210ENST00000413578 ZSCAN25Q6NSZ9 544 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 GIMAP6Q6P9H5 292 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 STARD7Q9NQZ5 370 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 TMEM39AQ9NV64 488 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 FAM184BQ9ULE4 1060 aa14.59□□□□□ -0.07
LIMS2-210ENST00000413578 COL11A1P12107 1806 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-210ENST00000413578 DUSP11O75319 330 aaKnown RBP14.58□□□□□ -0.08
LIMS2-210ENST00000413578 DNAJB2P25686 324 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 IRX5P78411 483 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-210ENST00000413578 GRIN2CQ14957 1233 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 KCNA10Q16322 511 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 RASIP1Q5U651 963 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 C16orf59Q7L2K0 433 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 PRPF38AQ8NAV1 312 aaKnown RBP14.58□□□□□ -0.08
LIMS2-210ENST00000413578 NUP133Q8WUM0 1156 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 OSBP2Q969R2 916 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 KATNBL1Q9H079 304 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 UPF3AQ9H1J1 476 aaKnown RBP14.58□□□□□ -0.08
LIMS2-210ENST00000413578 EPB41L4AQ9HCS5 686 aaPredicted RBP14.58□□□□□ -0.08
LIMS2-210ENST00000413578 ELP1O95163 1332 aa14.58□□□□□ -0.08
LIMS2-210ENST00000413578 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-210ENST00000413578 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-210ENST00000413578 DCDC2CA8MYV0 355 aa14.57□□□□□ -0.08
LIMS2-210ENST00000413578 CTAGE5O15320 804 aa14.57□□□□□ -0.08
LIMS2-210ENST00000413578 TIMP1P01033 207 aa14.57□□□□□ -0.08
LIMS2-210ENST00000413578 NKX3-2P78367 333 aa14.57□□□□□ -0.08
LIMS2-210ENST00000413578 MKL1Q969V6 931 aa14.57□□□□□ -0.08
LIMS2-210ENST00000413578 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.57□□□□□ -0.08
LIMS2-210ENST00000413578 SLC38A10Q9HBR0 1119 aa14.57□□□□□ -0.08
LIMS2-210ENST00000413578 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-210ENST00000413578 ZHX1Q9UKY1 873 aaPredicted RBP14.57□□□□□ -0.08
LIMS2-210ENST00000413578 SYNPO2Q9UMS6 1093 aa14.57□□□□□ -0.08
LIMS2-210ENST00000413578 MYH8P13535 1937 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 RAD21O60216 631 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 GJA9P57773 515 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 ACVR2BQ13705 512 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 MFSD5Q6N075 450 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 MIER1Q8N108 512 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 KBTBD3Q8NAB2 608 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 USP38Q8NB14 1042 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 DDX11Q96FC9 970 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 LRRCC1Q9C099 1032 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
LIMS2-210ENST00000413578 ZNFX1Q9P2E3 1918 aaKnown RBP14.56□□□□□ -0.08
LIMS2-210ENST00000413578 PLXNA1Q9UIW2 1896 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 SMARCA5O60264 1052 aaPredicted RBP14.55□□□□□ -0.08
LIMS2-210ENST00000413578 ASGR1P07306 291 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 OAZ1P54368 228 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 TMEM240Q5SV17 173 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 CPXCR1Q8N123 301 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 GMCL1P1Q8NEA9 526 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 APPBP2Q92624 585 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 CEP95Q96GE4 821 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 GLT1D1Q96MS3 346 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 ABHD16BQ9H3Z7 469 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 MKNK2Q9HBH9 465 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 RAVER2Q9HCJ3 691 aaKnown RBP14.55□□□□□ -0.08
LIMS2-210ENST00000413578 ECHDC1Q9NTX5 307 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 MTMR4Q9NYA4 1195 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 CLIP2Q9UDT6 1046 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 FBXO40Q9UH90 709 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 MROH7Q68CQ1 1323 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 PLIN4Q96Q06 1357 aa14.55□□□□□ -0.08
LIMS2-210ENST00000413578 ARVCFO00192 962 aa14.54□□□□□ -0.08
LIMS2-210ENST00000413578 ZBED4O75132 1171 aa14.54□□□□□ -0.08
LIMS2-210ENST00000413578 C6orf222P0C671 652 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-210ENST00000413578 CCDC144BQ3MJ40 725 aa14.54□□□□□ -0.08
LIMS2-210ENST00000413578 ARMCX2Q7L311 632 aa14.54□□□□□ -0.08
LIMS2-210ENST00000413578 FAM126BQ8IXS8 530 aa14.54□□□□□ -0.08
LIMS2-210ENST00000413578 PCSK9Q8NBP7 692 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms