RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 VPS53Q5VIR6 699 aa26.5■■□□□ 1.83
MSH6-202ENST00000411819 SLFN13Q68D06 897 aa26.5■■□□□ 1.83
MSH6-202ENST00000411819 FEM1BQ9UK73 627 aa26.5■■□□□ 1.83
MSH6-202ENST00000411819 TSPY2A6NKD2 308 aa26.49■■□□□ 1.83
MSH6-202ENST00000411819 MAGEA10P43363 369 aaPredicted RBP26.49■■□□□ 1.83
MSH6-202ENST00000411819 AAMPQ13685 434 aa26.49■■□□□ 1.83
MSH6-202ENST00000411819 B4GALNT3Q6L9W6 998 aa26.49■■□□□ 1.83
MSH6-202ENST00000411819 ARRDC4Q8NCT1 418 aa26.49■■□□□ 1.83
MSH6-202ENST00000411819 HELLSQ9NRZ9 838 aa26.49■■□□□ 1.83
MSH6-202ENST00000411819 TRIM6-TRIM34B2RNG4 842 aa26.48■■□□□ 1.83
MSH6-202ENST00000411819 BMP3P12645 472 aa26.48■■□□□ 1.83
MSH6-202ENST00000411819 ZNF792Q3KQV3 632 aa26.48■■□□□ 1.83
MSH6-202ENST00000411819 CHMP4CQ96CF2 233 aa26.48■■□□□ 1.83
MSH6-202ENST00000411819 DDX11Q96FC9 970 aa26.48■■□□□ 1.83
MSH6-202ENST00000411819 FAM227BQ96M60 508 aa26.48■■□□□ 1.83
MSH6-202ENST00000411819 TINF2Q9BSI4 451 aa26.48■■□□□ 1.83
MSH6-202ENST00000411819 RWDD1Q9H446 243 aaPredicted RBP26.48■■□□□ 1.83
MSH6-202ENST00000411819 RAVER2Q9HCJ3 691 aaKnown RBP26.48■■□□□ 1.83
MSH6-202ENST00000411819 STX8Q9UNK0 236 aa26.48■■□□□ 1.83
MSH6-202ENST00000411819 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.48■■□□□ 1.83
MSH6-202ENST00000411819 A0A0D9SFI3 127 aa26.47■■□□□ 1.83
MSH6-202ENST00000411819 IKQ13123 557 aaPredicted RBP26.47■■□□□ 1.83
MSH6-202ENST00000411819 DIS3Q9Y2L1 958 aaKnown RBP26.47■■□□□ 1.83
MSH6-202ENST00000411819 RIPK3Q9Y572 518 aa26.47■■□□□ 1.83
MSH6-202ENST00000411819 PPP4R3BQ5MIZ7 849 aa26.46■■□□□ 1.83
MSH6-202ENST00000411819 RILPL2Q969X0 211 aa26.46■■□□□ 1.83
MSH6-202ENST00000411819 SLC38A10Q9HBR0 1119 aa26.46■■□□□ 1.83
MSH6-202ENST00000411819 INCENPQ9NQS7 918 aa26.46■■□□□ 1.83
MSH6-202ENST00000411819 TOMM22Q9NS69 142 aa26.46■■□□□ 1.83
MSH6-202ENST00000411819 NRBP1Q9UHY1 535 aa26.46■■□□□ 1.83
MSH6-202ENST00000411819 SMCHD1A6NHR9 2005 aa26.45■■□□□ 1.82
MSH6-202ENST00000411819 TMEM232C9JQI7 657 aa26.45■■□□□ 1.82
MSH6-202ENST00000411819 ATP2A1O14983 1001 aa26.45■■□□□ 1.82
MSH6-202ENST00000411819 RANBP6O60518 1105 aaKnown RBP26.45■■□□□ 1.82
MSH6-202ENST00000411819 BMP8BP34820 402 aa26.45■■□□□ 1.82
MSH6-202ENST00000411819 SLC1A4P43007 532 aa26.45■■□□□ 1.82
MSH6-202ENST00000411819 STAT2P52630 851 aa26.45■■□□□ 1.82
MSH6-202ENST00000411819 MCMDC2Q4G0Z9 681 aa26.45■■□□□ 1.82
MSH6-202ENST00000411819 CNPY2Q9Y2B0 182 aa26.45■■□□□ 1.82
MSH6-202ENST00000411819 RARBP10826 455 aa26.44■■□□□ 1.82
MSH6-202ENST00000411819 NMIQ13287 307 aaPredicted RBP26.44■■□□□ 1.82
MSH6-202ENST00000411819 SMC5Q8IY18 1101 aa26.44■■□□□ 1.82
MSH6-202ENST00000411819 UBE2OQ9C0C9 1292 aaKnown RBP26.44■■□□□ 1.82
MSH6-202ENST00000411819 XPNPEP3Q9NQH7 507 aa26.44■■□□□ 1.82
MSH6-202ENST00000411819 SOX1O00570 391 aaPredicted RBP26.43■■□□□ 1.82
MSH6-202ENST00000411819 NMT2O60551 498 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 TAL1P17542 331 aaPredicted RBP26.43■■□□□ 1.82
MSH6-202ENST00000411819 MCCP23508 829 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 RTP1P59025 263 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 LRRC41Q15345 812 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 ANKRD35Q8N283 1001 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 EXOC6Q8TAG9 804 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 GMCL1Q96IK5 515 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 HOMER2Q9NSB8 354 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 ANAPC4Q9UJX5 808 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 MTMR7Q9Y216 660 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 ATP11BQ9Y2G3 1177 aa26.43■■□□□ 1.82
MSH6-202ENST00000411819 SZT2Q5T011 3432 aa26.42■■□□□ 1.82
MSH6-202ENST00000411819 OAZ1P54368 228 aa26.42■■□□□ 1.82
MSH6-202ENST00000411819 MDM2Q00987 491 aaPredicted RBP26.42■■□□□ 1.82
MSH6-202ENST00000411819 RRP12Q5JTH9 1297 aaKnown RBP26.42■■□□□ 1.82
MSH6-202ENST00000411819 FAM160B2Q86V87 743 aa26.42■■□□□ 1.82
MSH6-202ENST00000411819 LRCH3Q96II8 777 aa26.42■■□□□ 1.82
MSH6-202ENST00000411819 IL17RBQ9NRM6 502 aa26.42■■□□□ 1.82
MSH6-202ENST00000411819 PRKAG2Q9UGJ0 569 aa26.42■■□□□ 1.82
MSH6-202ENST00000411819 FBXO40Q9UH90 709 aa26.42■■□□□ 1.82
MSH6-202ENST00000411819 TACC3Q9Y6A5 838 aa26.42■■□□□ 1.82
MSH6-202ENST00000411819 AKR1A1P14550 325 aa26.41■■□□□ 1.82
MSH6-202ENST00000411819 ALX1Q15699 326 aa26.41■■□□□ 1.82
MSH6-202ENST00000411819 KCTD1Q719H9 257 aa26.41■■□□□ 1.82
MSH6-202ENST00000411819 ZNF589Q86UQ0 364 aaPredicted RBP26.41■■□□□ 1.82
MSH6-202ENST00000411819 CHD1LQ86WJ1 897 aa26.41■■□□□ 1.82
MSH6-202ENST00000411819 CHST13Q8NET6 341 aa26.41■■□□□ 1.82
MSH6-202ENST00000411819 CHURC1Q8WUH1 139 aa26.41■■□□□ 1.82
MSH6-202ENST00000411819 FERMT2Q96AC1 680 aa26.41■■□□□ 1.82
MSH6-202ENST00000411819 CCDC171Q6TFL3 1326 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 ORC4O43929 436 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 FGAP02671 866 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 FDX1P10109 184 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 HSPD1P10809 573 aaKnown RBP26.4■■□□□ 1.82
MSH6-202ENST00000411819 ADCYAP1R1P41586 468 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 RASGRP2Q7LDG7 609 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 TDHQ8IZJ6 230 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 MSL3Q8N5Y2 521 aaKnown RBP26.4■■□□□ 1.82
MSH6-202ENST00000411819 STAG1Q8WVM7 1258 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 LENG1Q96BZ8 264 aaPredicted RBP26.4■■□□□ 1.82
MSH6-202ENST00000411819 ZHX1Q9UKY1 873 aaPredicted RBP26.4■■□□□ 1.82
MSH6-202ENST00000411819 MCM3APO60318 1980 aa26.4■■□□□ 1.82
MSH6-202ENST00000411819 SYNGAP1Q96PV0 1343 aa26.39■■□□□ 1.82
MSH6-202ENST00000411819 DNAJC25-GNG10A0A024R161 153 aa26.39■■□□□ 1.82
MSH6-202ENST00000411819 PGK1P00558 417 aa26.39■■□□□ 1.82
MSH6-202ENST00000411819 IGHDP01880 384 aa26.39■■□□□ 1.82
MSH6-202ENST00000411819 ZNF865P0CJ78 1059 aaPredicted RBP26.39■■□□□ 1.82
MSH6-202ENST00000411819 SLC39A5Q6ZMH5 540 aa26.39■■□□□ 1.82
MSH6-202ENST00000411819 RNF180Q86T96 592 aa26.39■■□□□ 1.82
MSH6-202ENST00000411819 TICAM2Q86XR7 235 aa26.39■■□□□ 1.82
MSH6-202ENST00000411819 LBHD1Q9BQE6 289 aaPredicted RBP26.39■■□□□ 1.82
MSH6-202ENST00000411819 HAND2P61296 217 aa26.38■■□□□ 1.81
MSH6-202ENST00000411819 CCDC96Q2M329 555 aa26.38■■□□□ 1.81
MSH6-202ENST00000411819 ACAD9Q9H845 621 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms