RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 GPATCH4Q5T3I0 446 aaKnown RBP12.78□□□□□ -0.36
CHMP3-205ENST00000409810 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 STOX1Q6ZVD7 989 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 NCAPG2Q86XI2 1143 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 RIOX2Q8IUF8 465 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 MB21D2Q8IYB1 491 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-205ENST00000409810 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 MTA3Q9BTC8 594 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 MOV10L1Q9BXT6 1211 aaKnown RBP12.78□□□□□ -0.36
CHMP3-205ENST00000409810 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 MROH8Q9H579 483 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 GABRQQ9UN88 632 aa12.78□□□□□ -0.36
CHMP3-205ENST00000409810 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.36
CHMP3-205ENST00000409810 PLXNA1Q9UIW2 1896 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 STRNO43815 780 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 SNHG28P0DPA3 235 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 ERCC3P19447 782 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 GRK4P32298 578 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 MCM5P33992 734 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 RGS2P41220 211 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 UBXN2AP68543 259 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 WTAPQ15007 396 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 TRMT44Q8IYL2 757 aaKnown RBP12.77□□□□□ -0.37
CHMP3-205ENST00000409810 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 ARMC5Q96C12 935 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 SLC38A10Q9HBR0 1119 aa12.77□□□□□ -0.37
CHMP3-205ENST00000409810 ZNF214Q9UL59 606 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-205ENST00000409810 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-205ENST00000409810 RBBP6Q7Z6E9 1792 aaKnown RBP12.76□□□□□ -0.37
CHMP3-205ENST00000409810 SLC15A5A6NIM6 579 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 ADCY3O60266 1144 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 PARP1P09874 1014 aaKnown RBP12.76□□□□□ -0.37
CHMP3-205ENST00000409810 PTPREP23469 700 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 ZNF543Q08ER8 600 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 GRB14Q14449 540 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 SEC23AQ15436 765 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 ASPRV1Q53RT3 343 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 SYDE2Q5VT97 1194 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
CHMP3-205ENST00000409810 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 CPXCR1Q8N123 301 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 TMEM87BQ96K49 555 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 APBA2Q99767 749 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 SLC5A4Q9NY91 659 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 BIN2Q9UBW5 565 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-205ENST00000409810 GJD2Q9UKL4 321 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 PNMA2Q9UL42 364 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 TAF6LQ9Y6J9 622 aa12.76□□□□□ -0.37
CHMP3-205ENST00000409810 PRC1O43663 620 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 HMGB1P09429 215 aaKnown RBP12.75□□□□□ -0.37
CHMP3-205ENST00000409810 XRCC5P13010 732 aaKnown RBP12.75□□□□□ -0.37
CHMP3-205ENST00000409810 CYP2B6P20813 491 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 MAP2K5Q13163 448 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 TSGA10IPQ3SY00 556 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 MORN1Q5T089 497 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 RASGRP2Q7LDG7 609 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 ABRAQ8N0Z2 381 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 TMTC2Q8N394 836 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 ZNF333Q96JL9 665 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 NEK1Q96PY6 1258 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 GPCPD1Q9NPB8 672 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 FBXO40Q9UH90 709 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
CHMP3-205ENST00000409810 WDR19Q8NEZ3 1342 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 HMGCRP04035 888 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 FCER1AP12319 257 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 HSPA4P34932 840 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 KCTD2Q14681 263 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 TKFCQ3LXA3 575 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 CATIPQ7Z7H3 387 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 DPP9Q86TI2 863 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 CHST13Q8NET6 341 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 SH3TC2Q8TF17 1288 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 MMP19Q99542 508 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
CHMP3-205ENST00000409810 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
CHMP3-205ENST00000409810 SMCHD1A6NHR9 2005 aa12.74□□□□□ -0.37
CHMP3-205ENST00000409810 CCDC69A6NI79 296 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 CAPN15O75808 1086 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 ADORA2AP29274 412 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 SLC16A2P36021 539 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 ANTXR2P58335 489 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 TTBK2Q6IQ55 1244 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 CCDC174Q6PII3 467 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 IGDCC4Q8TDY8 1250 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 USP6NLQ92738 828 aa12.73□□□□□ -0.37
CHMP3-205ENST00000409810 BAZ2BQ9UIF8 2168 aaKnown RBP12.73□□□□□ -0.37
CHMP3-205ENST00000409810 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-205ENST00000409810 DHX16O60231 1041 aaKnown RBP12.72□□□□□ -0.37
CHMP3-205ENST00000409810 DDAH1O94760 285 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms