RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 CHMP4CQ96CF2 233 aa26.73■■□□□ 1.87
KDELR3-202ENST00000409006 IL17RBQ9NRM6 502 aa26.73■■□□□ 1.87
KDELR3-202ENST00000409006 SEPT4O43236 478 aa26.72■■□□□ 1.87
KDELR3-202ENST00000409006 NMT2O60551 498 aa26.72■■□□□ 1.87
KDELR3-202ENST00000409006 KCTD2Q14681 263 aa26.72■■□□□ 1.87
KDELR3-202ENST00000409006 GJC2Q5T442 439 aaPredicted RBP26.72■■□□□ 1.87
KDELR3-202ENST00000409006 CPXCR1Q8N123 301 aa26.72■■□□□ 1.87
KDELR3-202ENST00000409006 TEX13BQ9BXU2 312 aa26.72■■□□□ 1.87
KDELR3-202ENST00000409006 SENP6Q9GZR1 1112 aaPredicted RBP26.72■■□□□ 1.87
KDELR3-202ENST00000409006 SYNPO2Q9UMS6 1093 aa26.72■■□□□ 1.87
KDELR3-202ENST00000409006 SZT2Q5T011 3432 aa26.72■■□□□ 1.87
KDELR3-202ENST00000409006 SLC4A3P48751 1232 aa26.71■■□□□ 1.87
KDELR3-202ENST00000409006 NMIQ13287 307 aaPredicted RBP26.71■■□□□ 1.87
KDELR3-202ENST00000409006 MCMDC2Q4G0Z9 681 aa26.71■■□□□ 1.87
KDELR3-202ENST00000409006 ZNF589Q86UQ0 364 aaPredicted RBP26.71■■□□□ 1.87
KDELR3-202ENST00000409006 GDF15Q99988 308 aa26.71■■□□□ 1.87
KDELR3-202ENST00000409006 RAVER2Q9HCJ3 691 aaKnown RBP26.71■■□□□ 1.87
KDELR3-202ENST00000409006 ANAPC4Q9UJX5 808 aa26.71■■□□□ 1.87
KDELR3-202ENST00000409006 FEM1BQ9UK73 627 aa26.71■■□□□ 1.87
KDELR3-202ENST00000409006 TRIM6-TRIM34B2RNG4 842 aa26.7■■□□□ 1.86
KDELR3-202ENST00000409006 BMP3P12645 472 aa26.7■■□□□ 1.86
KDELR3-202ENST00000409006 COPB2P35606 906 aa26.7■■□□□ 1.86
KDELR3-202ENST00000409006 ALX1Q15699 326 aa26.7■■□□□ 1.86
KDELR3-202ENST00000409006 CHD1LQ86WJ1 897 aa26.7■■□□□ 1.86
KDELR3-202ENST00000409006 PLEKHM2Q8IWE5 1019 aa26.7■■□□□ 1.86
KDELR3-202ENST00000409006 SLC38A10Q9HBR0 1119 aa26.7■■□□□ 1.86
KDELR3-202ENST00000409006 TSPY2A6NKD2 308 aa26.69■■□□□ 1.86
KDELR3-202ENST00000409006 DNM1LO00429 736 aa26.69■■□□□ 1.86
KDELR3-202ENST00000409006 ATP2A1O14983 1001 aa26.69■■□□□ 1.86
KDELR3-202ENST00000409006 ZBED4O75132 1171 aa26.69■■□□□ 1.86
KDELR3-202ENST00000409006 FGAP02671 866 aa26.69■■□□□ 1.86
KDELR3-202ENST00000409006 TAL1P17542 331 aaPredicted RBP26.69■■□□□ 1.86
KDELR3-202ENST00000409006 RASGRP2Q7LDG7 609 aa26.69■■□□□ 1.86
KDELR3-202ENST00000409006 RILPL2Q969X0 211 aa26.69■■□□□ 1.86
KDELR3-202ENST00000409006 TINF2Q9BSI4 451 aa26.69■■□□□ 1.86
KDELR3-202ENST00000409006 DIS3Q9Y2L1 958 aaKnown RBP26.69■■□□□ 1.86
KDELR3-202ENST00000409006 TMEM232C9JQI7 657 aa26.68■■□□□ 1.86
KDELR3-202ENST00000409006 FGRP09769 529 aa26.68■■□□□ 1.86
KDELR3-202ENST00000409006 HSPD1P10809 573 aaKnown RBP26.68■■□□□ 1.86
KDELR3-202ENST00000409006 ATN1P54259 1190 aaPredicted RBP26.68■■□□□ 1.86
KDELR3-202ENST00000409006 NUCB1Q02818 461 aa26.68■■□□□ 1.86
KDELR3-202ENST00000409006 STX8Q9UNK0 236 aa26.68■■□□□ 1.86
KDELR3-202ENST00000409006 RANBP6O60518 1105 aaKnown RBP26.67■■□□□ 1.86
KDELR3-202ENST00000409006 MCCP23508 829 aa26.67■■□□□ 1.86
KDELR3-202ENST00000409006 MAGEA10P43363 369 aaPredicted RBP26.67■■□□□ 1.86
KDELR3-202ENST00000409006 DNAH12Q6ZR08 3092 aa26.67■■□□□ 1.86
KDELR3-202ENST00000409006 DNAJC25-GNG10A0A024R161 153 aa26.66■■□□□ 1.86
KDELR3-202ENST00000409006 ORC4O43929 436 aa26.66■■□□□ 1.86
KDELR3-202ENST00000409006 ARRDC4Q8NCT1 418 aa26.66■■□□□ 1.86
KDELR3-202ENST00000409006 A0A1W2PPC1 479 aa26.65■■□□□ 1.86
KDELR3-202ENST00000409006 SOX1O00570 391 aaPredicted RBP26.65■■□□□ 1.86
KDELR3-202ENST00000409006 MYCNP04198 464 aaPredicted RBP26.65■■□□□ 1.86
KDELR3-202ENST00000409006 ZNF865P0CJ78 1059 aaPredicted RBP26.65■■□□□ 1.86
KDELR3-202ENST00000409006 BMP8BP34820 402 aa26.65■■□□□ 1.86
KDELR3-202ENST00000409006 SLC1A4P43007 532 aa26.65■■□□□ 1.86
KDELR3-202ENST00000409006 KCTD1Q719H9 257 aa26.65■■□□□ 1.86
KDELR3-202ENST00000409006 TICAM2Q86XR7 235 aa26.65■■□□□ 1.86
KDELR3-202ENST00000409006 GMCL1Q96IK5 515 aa26.65■■□□□ 1.86
KDELR3-202ENST00000409006 OSBPL3Q9H4L5 887 aa26.65■■□□□ 1.86
KDELR3-202ENST00000409006 ISY1Q9ULR0 285 aaKnown RBP26.65■■□□□ 1.86
KDELR3-202ENST00000409006 CTDP1Q9Y5B0 961 aaPredicted RBP26.65■■□□□ 1.86
KDELR3-202ENST00000409006 SUPT16HQ9Y5B9 1047 aaKnown RBP26.65■■□□□ 1.86
KDELR3-202ENST00000409006 CCDC171Q6TFL3 1326 aa26.65■■□□□ 1.86
KDELR3-202ENST00000409006 SDSP20132 328 aa26.64■■□□□ 1.86
KDELR3-202ENST00000409006 NOVP48745 357 aa26.64■■□□□ 1.86
KDELR3-202ENST00000409006 HAND2P61296 217 aa26.64■■□□□ 1.86
KDELR3-202ENST00000409006 LRRC41Q15345 812 aa26.64■■□□□ 1.86
KDELR3-202ENST00000409006 DDX11Q96FC9 970 aa26.64■■□□□ 1.86
KDELR3-202ENST00000409006 NRBP1Q9UHY1 535 aa26.64■■□□□ 1.86
KDELR3-202ENST00000409006 ZNF536O15090 1300 aa26.64■■□□□ 1.85
KDELR3-202ENST00000409006 SNAI1O95863 264 aaPredicted RBP26.63■■□□□ 1.85
KDELR3-202ENST00000409006 STAT2P52630 851 aa26.63■■□□□ 1.85
KDELR3-202ENST00000409006 OAZ1P54368 228 aa26.63■■□□□ 1.85
KDELR3-202ENST00000409006 RRP12Q5JTH9 1297 aaKnown RBP26.63■■□□□ 1.85
KDELR3-202ENST00000409006 STAG1Q8WVM7 1258 aa26.63■■□□□ 1.85
KDELR3-202ENST00000409006 LENG1Q96BZ8 264 aaPredicted RBP26.63■■□□□ 1.85
KDELR3-202ENST00000409006 FGD4Q96M96 766 aa26.63■■□□□ 1.85
KDELR3-202ENST00000409006 MTMR7Q9Y216 660 aa26.63■■□□□ 1.85
KDELR3-202ENST00000409006 LTBP2Q14767 1821 aa26.62■■□□□ 1.85
KDELR3-202ENST00000409006 LAMA4Q16363 1823 aa26.62■■□□□ 1.85
KDELR3-202ENST00000409006 SNAP25P60880 206 aa26.62■■□□□ 1.85
KDELR3-202ENST00000409006 RCSD1Q6JBY9 416 aa26.62■■□□□ 1.85
KDELR3-202ENST00000409006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.62■■□□□ 1.85
KDELR3-202ENST00000409006 TOMM22Q9NS69 142 aa26.62■■□□□ 1.85
KDELR3-202ENST00000409006 HOMER2Q9NSB8 354 aa26.62■■□□□ 1.85
KDELR3-202ENST00000409006 ZMYM6O95789 1325 aa26.62■■□□□ 1.85
KDELR3-202ENST00000409006 KBTBD13C9JR72 458 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 RTP1P59025 263 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 SLC39A5Q6ZMH5 540 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 FAM160B2Q86V87 743 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 CHST13Q8NET6 341 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 CHURC1Q8WUH1 139 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 FERMT2Q96AC1 680 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 LRCH3Q96II8 777 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 AGBL1Q96MI9 1066 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 XPNPEP3Q9NQH7 507 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 LCTP09848 1927 aa26.61■■□□□ 1.85
KDELR3-202ENST00000409006 LAMA3Q16787 3333 aa26.6■■□□□ 1.85
KDELR3-202ENST00000409006 PGK1P00558 417 aa26.6■■□□□ 1.85
KDELR3-202ENST00000409006 RARBP10826 455 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms