RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 TSPY2A6NKD2 308 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 ORC2Q13416 577 aaPredicted RBP10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 MFSD14BQ5SR56 506 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 SARM1Q6SZW1 724 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 COL23A1Q86Y22 540 aaPredicted RBP10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 KRI1Q8N9T8 703 aaKnown RBP10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 FSIP1Q8NA03 581 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 NEDD1Q8NHV4 660 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 TRIM47Q96LD4 638 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 PHF20Q9BVI0 1012 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 KAT14Q9H8E8 782 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 MKNK2Q9HBH9 465 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 ATP13A2Q9NQ11 1180 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 HPSEQ9Y251 543 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 CDK5RAP2Q96SN8 1893 aa10.66□□□□□ -0.7
TPT1P4-201ENST00000403538 DDX60LQ5H9U9 1706 aaKnown RBP10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 ZNF500O60304 480 aaPredicted RBP10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 SNRPBP14678 240 aaKnown RBP10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 CDC25BP30305 580 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 ZRSR1Q15695 479 aaKnown RBP10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 RESP18Q5W5W9 173 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 DIS3L2Q8IYB7 885 aaKnown RBP10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 DAGLBQ8NCG7 672 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 CCDC148Q8NFR7 591 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 SLC16A10Q8TF71 515 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 CCDC12Q8WUD4 166 aaPredicted RBP10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 SDF4Q9BRK5 362 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 EHD4Q9H223 541 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 DHX36Q9H2U1 1008 aaKnown RBP10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 FAM13BQ9NYF5 915 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 SYNPO2Q9UMS6 1093 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 FCF1Q9Y324 198 aaKnown RBP10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 MRVI1Q9Y6F6 885 aa10.65□□□□□ -0.7
TPT1P4-201ENST00000403538 MYH1P12882 1939 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 ECM29Q5VYK3 1845 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 TTC24A2A3L6 582 aaPredicted RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 WTIPA6NIX2 430 aaPredicted RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 H0YIN7 160 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 C6orf229H3BNL8 230 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 ZNF202O95125 648 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 POLR3DP05423 398 aaPredicted RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 MSNP26038 577 aaKnown RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 HOXA7P31268 230 aaPredicted RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 KRT2P35908 639 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 ZNF165P49910 485 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 RHBDL3P58872 404 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 GRM4Q14833 912 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 PFKFB3Q16875 520 aaPredicted RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 STRIP1Q5VSL9 837 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 ARL6IP4Q66PJ3 421 aaKnown RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 RCSD1Q6JBY9 416 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 DPP8Q6V1X1 898 aaPredicted RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 CEP57L1Q8IYX8 460 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 TRIML1Q8N9V2 468 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 NUP133Q8WUM0 1156 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 PHKBQ93100 1093 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 CCDC17Q96LX7 622 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 SPZ1Q9BXG8 430 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 GTPBP4Q9BZE4 634 aaKnown RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 ZKSCAN5Q9Y2L8 839 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 SRPRBQ9Y5M8 271 aaKnown RBP10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 CLIC4Q9Y696 253 aa10.64□□□□□ -0.71
TPT1P4-201ENST00000403538 TRIM75PA6NK02 468 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 SMTNL1A8MU46 457 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 KIF28PB7ZC32 967 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 LAD1O00515 517 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 NEMFO60524 1076 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 MMP10P09238 476 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 TOP1P11387 765 aaKnown RBP10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 SCG2P13521 617 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 BTDP43251 543 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 SYKP43405 635 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 TERF1P54274 439 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 TFAP4Q01664 338 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 PKN1Q16512 942 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 TEX11Q8IYF3 940 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 SH3RF3Q8TEJ3 882 aaPredicted RBP10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 GLT8D2Q9H1C3 349 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 TUBE1Q9UJT0 475 aa10.63□□□□□ -0.71
TPT1P4-201ENST00000403538 COL2A1P02458 1487 aaPredicted RBP10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 ESYT2A0FGR8 921 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 PALM3A6NDB9 673 aaPredicted RBP10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 BTBD18B2RXH4 712 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 GOLGA6L19H0YKK7 550 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 IKBKBO14920 756 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 SMPD1P17405 629 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 RASA1P20936 1047 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 CDK8P49336 464 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 TPM4P67936 248 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 GUCY1B3Q02153 619 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 GABPAQ06546 454 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 SLC15A2Q16348 729 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 ZNF827Q17R98 1081 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 SOGA3Q5TF21 947 aa10.62□□□□□ -0.71
TPT1P4-201ENST00000403538 NT5DC1Q5TFE4 455 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms