RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 NONOQ15233 471 aaKnown RBP eCLIP15.19■□□□□ 0.024e-8■■■□□ 16.4
RERE-204ENST00000400908 LETM2Q2VYF4 491 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 MAP3K7O43318 606 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 THAP12O43422 761 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 WBP4O75554 376 aaKnown RBP15.19■□□□□ 0.02
RERE-204ENST00000400908 IFNB1P01574 187 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 SKIP12755 728 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 NPR1P16066 1061 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 OCA2Q04671 838 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 TMTC3Q6ZXV5 915 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 FCHSD1Q86WN1 690 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 CENPKQ9BS16 269 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 KIFC3Q9BVG8 833 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 BICC1Q9H694 974 aaKnown RBP15.19■□□□□ 0.02
RERE-204ENST00000400908 MED4Q9NPJ6 270 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 TMOD4Q9NZQ9 345 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 SAR1BQ9Y6B6 198 aa15.19■□□□□ 0.02
RERE-204ENST00000400908 APOBRQ0VD83 1088 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 RCN2Q14257 317 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 ZNF790Q6PG37 636 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 TTC41PQ6P2S7 1318 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 ZBTB41Q5SVQ8 909 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 CCDC197Q8NCU1 140 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 PIP4K2CQ8TBX8 421 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 NOD1Q9Y239 953 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 STK24Q9Y6E0 443 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 F8W031 263 aaPredicted RBP15.18■□□□□ 0.02
RERE-204ENST00000400908 DKC1O60832 514 aaKnown RBP eCLIP15.18■□□□□ 0.029e-7■■■■■ 97.2
RERE-204ENST00000400908 OATP04181 439 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 ZNF75DP51815 510 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 KRT81Q14533 505 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 PKD2L1Q9P0L9 805 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 MAD1L1Q9Y6D9 718 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 TAF11Q15544 211 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 TXLNGQ9NUQ3 528 aa15.18■□□□□ 0.02
RERE-204ENST00000400908 DDX17Q92841 729 aaKnown RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 IQCDQ96DY2 449 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 RAB44Q7Z6P3 723 aaPredicted RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 TRIM50Q86XT4 487 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 MLKLQ8NB16 471 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 SUCLA2Q9P2R7 463 aaPredicted RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 IL9RQ01113 521 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 E2F5Q15329 346 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 TRIM55Q9BYV6 548 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 IFIH1Q9BYX4 1025 aaKnown RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 IPO11Q9UI26 975 aaKnown RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 ABCC3O15438 1527 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 FAM135BQ49AJ0 1406 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 USP19O94966 1318 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 PLCG2P16885 1265 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 YWHAEP62258 255 aaKnown RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 APBA1Q02410 837 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 CDKL2Q92772 493 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 BZW2Q9Y6E2 419 aaKnown RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 ARHGEF35A5YM69 484 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 ST13P4Q8IZP2 240 aaPredicted RBP15.17■□□□□ 0.02
RERE-204ENST00000400908 TMCO5AQ8N6Q1 288 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 PLEKHA4Q9H4M7 779 aa15.17■□□□□ 0.02
RERE-204ENST00000400908 TOM1O60784 492 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 LMNAP02545 664 aaKnown RBP15.16■□□□□ 0.02
RERE-204ENST00000400908 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
RERE-204ENST00000400908 CCDC159P0C7I6 412 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 FLOT2Q14254 428 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 C16orf87Q6PH81 154 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 COPG1Q9Y678 874 aaKnown RBP15.16■□□□□ 0.02
RERE-204ENST00000400908 KRIT1O00522 736 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 KCNA4P22459 653 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 ECE1P42892 770 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 AK2P54819 239 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 PDZD4Q76G19 769 aaPredicted RBP15.16■□□□□ 0.02
RERE-204ENST00000400908 DCLK2Q8N568 766 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 TRIML2Q8N7C3 387 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 BBOF1Q8ND07 529 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 ZNF277Q9NRM2 450 aaPredicted RBP15.16■□□□□ 0.02
RERE-204ENST00000400908 NVLO15381 856 aaKnown RBP15.16■□□□□ 0.02
RERE-204ENST00000400908 SAT1P21673 171 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 ARHGDIAP52565 204 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 PDXDC1Q6P996 788 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 ANGPTL2Q9UKU9 493 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 KCNH3Q9ULD8 1083 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 CEP70Q8NHQ1 597 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 SKA2Q8WVK7 121 aaPredicted RBP15.16■□□□□ 0.02
RERE-204ENST00000400908 BTG4Q9NY30 223 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 PLEKHG1Q9ULL1 1385 aa15.16■□□□□ 0.02
RERE-204ENST00000400908 DZIP3Q86Y13 1208 aaKnown RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 OTUD7AQ8TE49 926 aaPredicted RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 TAB2Q9NYJ8 693 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 HOXB7P09629 217 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 LMNB1P20700 586 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 EEF1GP26641 437 aaKnown RBP15.15■□□□□ 0.02
RERE-204ENST00000400908 RFC4P35249 363 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 TFCP2Q12800 502 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 ZNF804AQ7Z570 1209 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 TRIM42Q8IWZ5 723 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 EFCAB13Q8IY85 973 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 TRIM58Q8NG06 486 aa15.15■□□□□ 0.02
RERE-204ENST00000400908 INTS4Q96HW7 963 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms