RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MINDY4BA8MYZ0 360 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 ATP2A1O14983 1001 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 KIAA0355O15063 1070 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 RAD21O60216 631 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 NDUFB10O96000 172 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 AKR1A1P14550 325 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 COPB2P35606 906 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 MAMDC4Q6UXC1 1216 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 RNF180Q86T96 592 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.42□□□□□ -0.1
TFF3-202ENST00000398431 PRPF38AQ8NAV1 312 aaKnown RBP14.42□□□□□ -0.1
TFF3-202ENST00000398431 MKL1Q969V6 931 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 SLF1Q9BQI6 1058 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 TTYH1Q9H313 450 aaPredicted RBP14.42□□□□□ -0.1
TFF3-202ENST00000398431 EPB41L4AQ9HCS5 686 aaPredicted RBP14.42□□□□□ -0.1
TFF3-202ENST00000398431 CLIP2Q9UDT6 1046 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 RCAN3Q9UKA8 241 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 ROBO3Q96MS0 1386 aa14.42□□□□□ -0.1
TFF3-202ENST00000398431 CLTBP09497 229 aa14.41□□□□□ -0.1
TFF3-202ENST00000398431 IRX5P78411 483 aaPredicted RBP14.41□□□□□ -0.1
TFF3-202ENST00000398431 SMAD3P84022 425 aaKnown RBP14.41□□□□□ -0.1
TFF3-202ENST00000398431 FAAP100Q0VG06 881 aa14.41□□□□□ -0.1
TFF3-202ENST00000398431 SNRNP48Q6IEG0 339 aaKnown RBP14.41□□□□□ -0.1
TFF3-202ENST00000398431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
TFF3-202ENST00000398431 MSL3Q8N5Y2 521 aaKnown RBP14.41□□□□□ -0.1
TFF3-202ENST00000398431 APPBP2Q92624 585 aa14.41□□□□□ -0.1
TFF3-202ENST00000398431 FGD4Q96M96 766 aa14.41□□□□□ -0.1
TFF3-202ENST00000398431 TSEN34Q9BSV6 310 aaKnown RBP14.41□□□□□ -0.1
TFF3-202ENST00000398431 TEX13BQ9BXU2 312 aa14.41□□□□□ -0.1
TFF3-202ENST00000398431 DCTPP1Q9H773 170 aa14.41□□□□□ -0.1
TFF3-202ENST00000398431 MKNK2Q9HBH9 465 aa14.41□□□□□ -0.1
TFF3-202ENST00000398431 RNF113AO15541 343 aaKnown RBP14.4□□□□□ -0.1
TFF3-202ENST00000398431 ADCY6O43306 1168 aa14.4□□□□□ -0.1
TFF3-202ENST00000398431 ACLYP53396 1101 aa14.4□□□□□ -0.1
TFF3-202ENST00000398431 TSHZ3Q63HK5 1081 aa14.4□□□□□ -0.1
TFF3-202ENST00000398431 ANKRD33Q7Z3H0 272 aa14.4□□□□□ -0.1
TFF3-202ENST00000398431 CPXCR1Q8N123 301 aa14.4□□□□□ -0.1
TFF3-202ENST00000398431 TOX2Q96NM4 488 aa14.4□□□□□ -0.1
TFF3-202ENST00000398431 CNPY2Q9Y2B0 182 aa14.4□□□□□ -0.1
TFF3-202ENST00000398431 SYNGAP1Q96PV0 1343 aa14.4□□□□□ -0.1
TFF3-202ENST00000398431 MYADML2A6NDP7 307 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 PATL2C9JE40 543 aaKnown RBP14.39□□□□□ -0.11
TFF3-202ENST00000398431 M0R2C6 588 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 GPAA1O43292 621 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 PQBP1O60828 265 aaKnown RBP14.39□□□□□ -0.11
TFF3-202ENST00000398431 PRDM1O75626 825 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 KCNA10Q16322 511 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 ZNF467Q7Z7K2 595 aaPredicted RBP14.39□□□□□ -0.11
TFF3-202ENST00000398431 DDX11Q96FC9 970 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 SLC38A10Q9HBR0 1119 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 RAVER2Q9HCJ3 691 aaKnown RBP14.39□□□□□ -0.11
TFF3-202ENST00000398431 TMEM39AQ9NV64 488 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 MTMR4Q9NYA4 1195 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 SYNRGQ9UMZ2 1314 aa14.39□□□□□ -0.11
TFF3-202ENST00000398431 ZBED4O75132 1171 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 DUSP11O75319 330 aaKnown RBP14.38□□□□□ -0.11
TFF3-202ENST00000398431 RAG1P15918 1043 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 CDK7P50613 346 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 ACVR2BQ13705 512 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 ZNF444Q8N0Y2 327 aaPredicted RBP14.38□□□□□ -0.11
TFF3-202ENST00000398431 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 CEP95Q96GE4 821 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 SEC62Q99442 399 aaKnown RBP14.38□□□□□ -0.11
TFF3-202ENST00000398431 MYH4Q9Y623 1939 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 MCM3APO60318 1980 aa14.38□□□□□ -0.11
TFF3-202ENST00000398431 MOXD2PA6NHM9 499 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 CTAGE5O15320 804 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 ZFYP08048 801 aaPredicted RBP14.37□□□□□ -0.11
TFF3-202ENST00000398431 C16orf59Q7L2K0 433 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 NEDD1Q8NHV4 660 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 KIFC2Q96AC6 838 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 KATNBL1Q9H079 304 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 STARD7Q9NQZ5 370 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.37□□□□□ -0.11
TFF3-202ENST00000398431 FEM1BQ9UK73 627 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 ZHX1Q9UKY1 873 aaPredicted RBP14.37□□□□□ -0.11
TFF3-202ENST00000398431 TBX21Q9UL17 535 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 UNC80Q8N2C7 3258 aa14.37□□□□□ -0.11
TFF3-202ENST00000398431 TIMP1P01033 207 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 GNAT2P19087 354 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 CST5P28325 142 aaPredicted RBP14.36□□□□□ -0.11
TFF3-202ENST00000398431 GJA9P57773 515 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 CCDC144BQ3MJ40 725 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 CHST13Q8NET6 341 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 MAFAQ8NHW3 353 aaPredicted RBP14.36□□□□□ -0.11
TFF3-202ENST00000398431 NUP133Q8WUM0 1156 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 RNPC3Q96LT9 517 aaKnown RBP14.36□□□□□ -0.11
TFF3-202ENST00000398431 UPF3AQ9H1J1 476 aaKnown RBP14.36□□□□□ -0.11
TFF3-202ENST00000398431 ABHD16BQ9H3Z7 469 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
TFF3-202ENST00000398431 DCDC2CA8MYV0 355 aa14.35□□□□□ -0.11
TFF3-202ENST00000398431 TTLL1O95922 423 aa14.35□□□□□ -0.11
TFF3-202ENST00000398431 APPP05067 770 aa14.35□□□□□ -0.11
TFF3-202ENST00000398431 ASGR1P07306 291 aa14.35□□□□□ -0.11
TFF3-202ENST00000398431 TDO2P48775 406 aa14.35□□□□□ -0.11
TFF3-202ENST00000398431 OAZ1P54368 228 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms