RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 RNF20Q5VTR2 975 aa22.08■■□□□ 1.13
COLCA2-201ENST00000398035 REPS2Q8NFH8 660 aa22.08■■□□□ 1.13
COLCA2-201ENST00000398035 ZKSCAN3Q9BRR0 538 aa22.08■■□□□ 1.13
COLCA2-201ENST00000398035 ZNF214Q9UL59 606 aaPredicted RBP22.08■■□□□ 1.13
COLCA2-201ENST00000398035 GREB1LQ9C091 1923 aaPredicted RBP22.08■■□□□ 1.12
COLCA2-201ENST00000398035 ERICH2A1L162 156 aa22.07■■□□□ 1.12
COLCA2-201ENST00000398035 HMGCRP04035 888 aa22.07■■□□□ 1.12
COLCA2-201ENST00000398035 HOXC6P09630 235 aa22.07■■□□□ 1.12
COLCA2-201ENST00000398035 SART3Q15020 963 aaKnown RBP22.07■■□□□ 1.12
COLCA2-201ENST00000398035 GPATCH4Q5T3I0 446 aaKnown RBP22.07■■□□□ 1.12
COLCA2-201ENST00000398035 KCTD1Q719H9 257 aa22.07■■□□□ 1.12
COLCA2-201ENST00000398035 NKX2-3Q8TAU0 364 aa22.07■■□□□ 1.12
COLCA2-201ENST00000398035 APBA2Q99767 749 aa22.07■■□□□ 1.12
COLCA2-201ENST00000398035 ELNP15502 786 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 SOX10P56693 466 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 NECTIN1Q15223 517 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 CCDC96Q2M329 555 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 BTNL9Q6UXG8 535 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 DPP9Q86TI2 863 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 PNMA2Q9UL42 364 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 TNKSO95271 1327 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 SNHG28P0DPA3 235 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 PDHBP11177 359 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 KCTD2Q14681 263 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 IFIT1BQ5T764 474 aaKnown RBP22.06■■□□□ 1.12
COLCA2-201ENST00000398035 SNRNP48Q6IEG0 339 aaKnown RBP22.06■■□□□ 1.12
COLCA2-201ENST00000398035 ENAHQ8N8S7 591 aaPredicted RBP22.06■■□□□ 1.12
COLCA2-201ENST00000398035 PNMA1Q8ND90 353 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 MTA3Q9BTC8 594 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 FBXO40Q9UH90 709 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 MTMR7Q9Y216 660 aa22.06■■□□□ 1.12
COLCA2-201ENST00000398035 MYH8P13535 1937 aa22.05■■□□□ 1.12
COLCA2-201ENST00000398035 INHAP05111 366 aa22.05■■□□□ 1.12
COLCA2-201ENST00000398035 CPXCR1Q8N123 301 aa22.05■■□□□ 1.12
COLCA2-201ENST00000398035 RNF208Q9H0X6 261 aa22.05■■□□□ 1.12
COLCA2-201ENST00000398035 ZKSCAN1P17029 563 aaPredicted RBP22.04■■□□□ 1.12
COLCA2-201ENST00000398035 ADORA2AP29274 412 aa22.04■■□□□ 1.12
COLCA2-201ENST00000398035 CHST13Q8NET6 341 aa22.04■■□□□ 1.12
COLCA2-201ENST00000398035 PRR12Q9ULL5 1215 aa22.04■■□□□ 1.12
COLCA2-201ENST00000398035 SLC27A2O14975 620 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 GJB1P08034 283 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 CCL5P13501 91 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 ZNF543Q08ER8 600 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 TKFCQ3LXA3 575 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 MFSD14CQ5VZR4 134 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 CREB3L3Q68CJ9 461 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 TMTC2Q8N394 836 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 MMP19Q99542 508 aa22.03■■□□□ 1.12
COLCA2-201ENST00000398035 RAVER2Q9HCJ3 691 aaKnown RBP22.03■■□□□ 1.12
COLCA2-201ENST00000398035 RPTORQ8N122 1335 aa22.02■■□□□ 1.12
COLCA2-201ENST00000398035 IFIT3O14879 490 aaKnown RBP22.02■■□□□ 1.12
COLCA2-201ENST00000398035 REC8O95072 547 aa22.02■■□□□ 1.12
COLCA2-201ENST00000398035 MTFR1Q15390 333 aa22.02■■□□□ 1.12
COLCA2-201ENST00000398035 CYB5R4Q7L1T6 521 aa22.02■■□□□ 1.12
COLCA2-201ENST00000398035 TRIB2Q92519 343 aa22.02■■□□□ 1.12
COLCA2-201ENST00000398035 HMX1Q9NP08 348 aaPredicted RBP22.02■■□□□ 1.12
COLCA2-201ENST00000398035 GPCPD1Q9NPB8 672 aa22.02■■□□□ 1.12
COLCA2-201ENST00000398035 DIS3Q9Y2L1 958 aaKnown RBP22.02■■□□□ 1.12
COLCA2-201ENST00000398035 MYCP01106 439 aaPredicted RBP22.01■■□□□ 1.11
COLCA2-201ENST00000398035 MCM5P33992 734 aa22.01■■□□□ 1.11
COLCA2-201ENST00000398035 SEC23AQ15436 765 aa22.01■■□□□ 1.11
COLCA2-201ENST00000398035 ASPRV1Q53RT3 343 aa22.01■■□□□ 1.11
COLCA2-201ENST00000398035 SYDE2Q5VT97 1194 aa22.01■■□□□ 1.11
COLCA2-201ENST00000398035 OLFML2BQ68BL8 750 aa22.01■■□□□ 1.11
COLCA2-201ENST00000398035 CHMP4CQ96CF2 233 aa22.01■■□□□ 1.11
COLCA2-201ENST00000398035 EPB41L2O43491 1005 aaKnown RBP22■■□□□ 1.11
COLCA2-201ENST00000398035 MLLT1Q03111 559 aaPredicted RBP22■■□□□ 1.11
COLCA2-201ENST00000398035 TSGA10IPQ3SY00 556 aa22■■□□□ 1.11
COLCA2-201ENST00000398035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22■■□□□ 1.11
COLCA2-201ENST00000398035 DDX11Q96FC9 970 aa22■■□□□ 1.11
COLCA2-201ENST00000398035 POTEFA5A3E0 1075 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 PARP1P09874 1014 aaKnown RBP21.99■■□□□ 1.11
COLCA2-201ENST00000398035 GJA8P48165 433 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 SLC4A3P48751 1232 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 KRT32Q14532 448 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 WTAPQ15007 396 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 MAP3K21Q5TCX8 1036 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 TTBK2Q6IQ55 1244 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 STOX1Q6ZVD7 989 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 MB21D2Q8IYB1 491 aaPredicted RBP21.99■■□□□ 1.11
COLCA2-201ENST00000398035 UNC93B1Q9H1C4 597 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 RANBP17Q9H2T7 1088 aaKnown RBP21.99■■□□□ 1.11
COLCA2-201ENST00000398035 RIPK3Q9Y572 518 aa21.99■■□□□ 1.11
COLCA2-201ENST00000398035 FRMPD2Q68DX3 1309 aaPredicted RBP21.99■■□□□ 1.11
COLCA2-201ENST00000398035 COBLO75128 1261 aa21.98■■□□□ 1.11
COLCA2-201ENST00000398035 ICAM1P05362 532 aa21.98■■□□□ 1.11
COLCA2-201ENST00000398035 SLC16A2P36021 539 aa21.98■■□□□ 1.11
COLCA2-201ENST00000398035 TMEM67Q5HYA8 995 aa21.98■■□□□ 1.11
COLCA2-201ENST00000398035 ANKRD35Q8N283 1001 aa21.98■■□□□ 1.11
COLCA2-201ENST00000398035 TMEM87BQ96K49 555 aa21.98■■□□□ 1.11
COLCA2-201ENST00000398035 PAK6Q9NQU5 681 aaPredicted RBP21.98■■□□□ 1.11
COLCA2-201ENST00000398035 SGPL1O95470 568 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 PRKAR2AP13861 404 aaKnown RBP21.97■■□□□ 1.11
COLCA2-201ENST00000398035 CCL14Q16627 93 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 NPLOC4Q8TAT6 608 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 IGDCC4Q8TDY8 1250 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 U2AF1L4Q8WU68 220 aaKnown RBP21.97■■□□□ 1.11
COLCA2-201ENST00000398035 ACAD9Q9H845 621 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 TAF6LQ9Y6J9 622 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 ZNF536O15090 1300 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms