RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ZNFX1Q9P2E3 1918 aaKnown RBP16.47■□□□□ 0.23
SEC13-204ENST00000397099 ADORA2AP29274 412 aa16.47■□□□□ 0.23
SEC13-204ENST00000397099 IRX6P78412 446 aaPredicted RBP16.47■□□□□ 0.23
SEC13-204ENST00000397099 CCL14Q16627 93 aa16.47■□□□□ 0.23
SEC13-204ENST00000397099 AKNAD1Q5T1N1 836 aa16.47■□□□□ 0.23
SEC13-204ENST00000397099 SLFN13Q68D06 897 aa16.47■□□□□ 0.23
SEC13-204ENST00000397099 RCSD1Q6JBY9 416 aa16.47■□□□□ 0.23
SEC13-204ENST00000397099 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
SEC13-204ENST00000397099 FAM160B2Q86V87 743 aa16.47■□□□□ 0.23
SEC13-204ENST00000397099 DIS3LQ8TF46 1054 aaKnown RBP16.47■□□□□ 0.23
SEC13-204ENST00000397099 STAG1Q8WVM7 1258 aa16.47■□□□□ 0.23
SEC13-204ENST00000397099 ZNF214Q9UL59 606 aaPredicted RBP16.47■□□□□ 0.23
SEC13-204ENST00000397099 SLC1A4P43007 532 aa16.46■□□□□ 0.23
SEC13-204ENST00000397099 STAT2P52630 851 aa16.46■□□□□ 0.23
SEC13-204ENST00000397099 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.23
SEC13-204ENST00000397099 LRRC47Q8N1G4 583 aaKnown RBP16.46■□□□□ 0.23
SEC13-204ENST00000397099 ESR2Q92731 530 aa16.46■□□□□ 0.23
SEC13-204ENST00000397099 TOMM22Q9NS69 142 aa16.46■□□□□ 0.23
SEC13-204ENST00000397099 FBXO28Q9NVF7 368 aa16.46■□□□□ 0.23
SEC13-204ENST00000397099 FBXO40Q9UH90 709 aa16.46■□□□□ 0.23
SEC13-204ENST00000397099 DIS3Q9Y2L1 958 aaKnown RBP16.46■□□□□ 0.23
SEC13-204ENST00000397099 PDE4AP27815 886 aa16.45■□□□□ 0.22
SEC13-204ENST00000397099 KCTD2Q14681 263 aa16.45■□□□□ 0.22
SEC13-204ENST00000397099 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
SEC13-204ENST00000397099 REPS2Q8NFH8 660 aa16.45■□□□□ 0.22
SEC13-204ENST00000397099 SLC38A10Q9HBR0 1119 aa16.45■□□□□ 0.22
SEC13-204ENST00000397099 DNAH12Q6ZR08 3092 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 TOP1P11387 765 aaKnown RBP16.44■□□□□ 0.22
SEC13-204ENST00000397099 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.44■□□□□ 0.22
SEC13-204ENST00000397099 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 MMP19Q99542 508 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
SEC13-204ENST00000397099 NBPF3Q9H094 633 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 CNNM2Q9H8M5 875 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 IL17RBQ9NRM6 502 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 NRBP1Q9UHY1 535 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 PNMA2Q9UL42 364 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 OGDHLQ9ULD0 1010 aa16.44■□□□□ 0.22
SEC13-204ENST00000397099 CEP290O15078 2479 aa16.43■□□□□ 0.22
SEC13-204ENST00000397099 CCND3P30281 292 aaPredicted RBP16.43■□□□□ 0.22
SEC13-204ENST00000397099 RRP12Q5JTH9 1297 aaKnown RBP16.43■□□□□ 0.22
SEC13-204ENST00000397099 SNRNP48Q6IEG0 339 aaKnown RBP16.43■□□□□ 0.22
SEC13-204ENST00000397099 CENPQQ7L2Z9 268 aaPredicted RBP16.43■□□□□ 0.22
SEC13-204ENST00000397099 IQCA1Q86XH1 822 aa16.43■□□□□ 0.22
SEC13-204ENST00000397099 MSL3Q8N5Y2 521 aaKnown RBP16.43■□□□□ 0.22
SEC13-204ENST00000397099 CHST13Q8NET6 341 aa16.43■□□□□ 0.22
SEC13-204ENST00000397099 C11orf49Q9H6J7 331 aa16.43■□□□□ 0.22
SEC13-204ENST00000397099 PLXNA1Q9UIW2 1896 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 TMEM232C9JQI7 657 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 IGHA2P01877 340 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 GSPT1P15170 499 aaKnown RBP16.42■□□□□ 0.22
SEC13-204ENST00000397099 CNGA1P29973 690 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 HAND2P61296 217 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 IKQ13123 557 aaPredicted RBP16.42■□□□□ 0.22
SEC13-204ENST00000397099 TKFCQ3LXA3 575 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 DGKHQ86XP1 1220 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 C7orf61Q8IZ16 206 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 KRT23Q9C075 422 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
SEC13-204ENST00000397099 RBM27Q9P2N5 1060 aaKnown RBP16.42■□□□□ 0.22
SEC13-204ENST00000397099 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
SEC13-204ENST00000397099 MCCP23508 829 aa16.41■□□□□ 0.22
SEC13-204ENST00000397099 FXR1P51114 621 aaKnown RBP eCLIP16.41■□□□□ 0.22
SEC13-204ENST00000397099 NPLOC4Q8TAT6 608 aa16.41■□□□□ 0.22
SEC13-204ENST00000397099 MAML3Q96JK9 1138 aa16.41■□□□□ 0.22
SEC13-204ENST00000397099 INCENPQ9NQS7 918 aa16.41■□□□□ 0.22
SEC13-204ENST00000397099 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
SEC13-204ENST00000397099 NMT2O60551 498 aa16.4■□□□□ 0.22
SEC13-204ENST00000397099 COBLO75128 1261 aa16.4■□□□□ 0.22
SEC13-204ENST00000397099 CHMLP26374 656 aa16.4■□□□□ 0.22
SEC13-204ENST00000397099 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
SEC13-204ENST00000397099 DDX20Q9UHI6 824 aaKnown RBP16.4■□□□□ 0.22
SEC13-204ENST00000397099 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
SEC13-204ENST00000397099 FRMPD3Q5JV73 1810 aa16.4■□□□□ 0.22
SEC13-204ENST00000397099 SEPT4O43236 478 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 CYP2C19P33261 490 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 TRDNQ13061 729 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 GPATCH4Q5T3I0 446 aaKnown RBP16.39■□□□□ 0.21
SEC13-204ENST00000397099 LHX8Q68G74 356 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 BTNL9Q6UXG8 535 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 ZNF467Q7Z7K2 595 aaPredicted RBP16.39■□□□□ 0.21
SEC13-204ENST00000397099 TBC1D10CQ8IV04 446 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 CPXCR1Q8N123 301 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 TMEM47Q9BQJ4 181 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 TINF2Q9BSI4 451 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 TACC3Q9Y6A5 838 aa16.39■□□□□ 0.21
SEC13-204ENST00000397099 CYBAP13498 195 aa16.38■□□□□ 0.21
SEC13-204ENST00000397099 MNX1P50219 401 aaPredicted RBP16.38■□□□□ 0.21
SEC13-204ENST00000397099 CCDC96Q2M329 555 aa16.38■□□□□ 0.21
SEC13-204ENST00000397099 ANKRD35Q8N283 1001 aa16.38■□□□□ 0.21
SEC13-204ENST00000397099 ANKS1AQ92625 1134 aa16.38■□□□□ 0.21
SEC13-204ENST00000397099 PFASO15067 1338 aa16.38■□□□□ 0.21
SEC13-204ENST00000397099 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
SEC13-204ENST00000397099 DNAJC25-GNG10A0A024R161 153 aa16.37■□□□□ 0.21
SEC13-204ENST00000397099 KCTD1Q719H9 257 aa16.37■□□□□ 0.21
SEC13-204ENST00000397099 ARRDC4Q8NCT1 418 aa16.37■□□□□ 0.21
SEC13-204ENST00000397099 ACAD9Q9H845 621 aa16.37■□□□□ 0.21
SEC13-204ENST00000397099 RAVER2Q9HCJ3 691 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms