RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 PPP4R3BQ5MIZ7 849 aa14.36□□□□□ -0.11
GAPDH-202ENST00000396856 FAM83BQ5T0W9 1011 aa14.36□□□□□ -0.11
GAPDH-202ENST00000396856 MKL1Q969V6 931 aa14.36□□□□□ -0.11
GAPDH-202ENST00000396856 FBXO28Q9NVF7 368 aa14.36□□□□□ -0.11
GAPDH-202ENST00000396856 MTMR4Q9NYA4 1195 aa14.36□□□□□ -0.11
GAPDH-202ENST00000396856 CLIP2Q9UDT6 1046 aa14.36□□□□□ -0.11
GAPDH-202ENST00000396856 GREB1LQ9C091 1923 aaPredicted RBP14.36□□□□□ -0.11
GAPDH-202ENST00000396856 PLIN4Q96Q06 1357 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 PRDM1O75626 825 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 TTLL1O95922 423 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 IGHA2P01877 340 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 TSPY3P0CV98 308 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 TSPY8P0CW00 308 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 RIOX2Q8IUF8 465 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 SMC5Q8IY18 1101 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 CEP95Q96GE4 821 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 SLF1Q9BQI6 1058 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 HELLSQ9NRZ9 838 aa14.35□□□□□ -0.11
GAPDH-202ENST00000396856 DDX20Q9UHI6 824 aaKnown RBP14.35□□□□□ -0.11
GAPDH-202ENST00000396856 XIRP2A4UGR9 3374 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 COBLO75128 1261 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 NDUFB10O96000 172 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 FOSL2P15408 326 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 CNGA1P29973 690 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
GAPDH-202ENST00000396856 CYP2C19P33261 490 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 STAT3P40763 770 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 PRPF38AQ8NAV1 312 aaKnown RBP14.34□□□□□ -0.11
GAPDH-202ENST00000396856 GMCL1P1Q8NEA9 526 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 NEDD1Q8NHV4 660 aa14.34□□□□□ -0.11
GAPDH-202ENST00000396856 ZNF214Q9UL59 606 aaPredicted RBP14.34□□□□□ -0.11
GAPDH-202ENST00000396856 CYBAP13498 195 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 ATN1P54259 1190 aaPredicted RBP14.33□□□□□ -0.12
GAPDH-202ENST00000396856 TFAP4Q01664 338 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
GAPDH-202ENST00000396856 KCTD2Q14681 263 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 CCDC129Q6ZRS4 1044 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 REPS2Q8NFH8 660 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 MMP19Q99542 508 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.12
GAPDH-202ENST00000396856 TEX13BQ9BXU2 312 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 FEM1BQ9UK73 627 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 PARP14Q460N5 1801 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
GAPDH-202ENST00000396856 TMEM265A0A087WTH1 108 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 ATP2A1O14983 1001 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 ZBED4O75132 1171 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 RTP1P59025 263 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 GRIN2CQ14957 1233 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 ALX1Q15699 326 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 MCMDC2Q4G0Z9 681 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 BADQ92934 168 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 MAML3Q96JK9 1138 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 NRBP1Q9UHY1 535 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 ANAPC4Q9UJX5 808 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 DIS3Q9Y2L1 958 aaKnown RBP14.32□□□□□ -0.12
GAPDH-202ENST00000396856 CTDP1Q9Y5B0 961 aaPredicted RBP14.32□□□□□ -0.12
GAPDH-202ENST00000396856 CHD9Q3L8U1 2897 aa14.32□□□□□ -0.12
GAPDH-202ENST00000396856 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
GAPDH-202ENST00000396856 DNM1LO00429 736 aa14.31□□□□□ -0.12
GAPDH-202ENST00000396856 FOXP2O15409 715 aa14.31□□□□□ -0.12
GAPDH-202ENST00000396856 SEPT4O43236 478 aa14.31□□□□□ -0.12
GAPDH-202ENST00000396856 FDX1P10109 184 aa14.31□□□□□ -0.12
GAPDH-202ENST00000396856 FAM47AQ5JRC9 791 aa14.31□□□□□ -0.12
GAPDH-202ENST00000396856 SNRNP48Q6IEG0 339 aaKnown RBP14.31□□□□□ -0.12
GAPDH-202ENST00000396856 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
GAPDH-202ENST00000396856 LRRC47Q8N1G4 583 aaKnown RBP14.31□□□□□ -0.12
GAPDH-202ENST00000396856 TRPV1Q8NER1 839 aa14.31□□□□□ -0.12
GAPDH-202ENST00000396856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
GAPDH-202ENST00000396856 NCOR1O75376 2440 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 TRIM43BA6NCK2 446 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 TRIM6-TRIM34B2RNG4 842 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 BMP3P12645 472 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 ITGB8P26012 769 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 OAZ1P54368 228 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 MFAP1P55081 439 aaKnown RBP14.3□□□□□ -0.12
GAPDH-202ENST00000396856 SNX17Q15036 470 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 SLFN13Q68D06 897 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 B4GALNT3Q6L9W6 998 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 SLC39A5Q6ZMH5 540 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 SH3RF1Q7Z6J0 888 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 ARRDC4Q8NCT1 418 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 KIFC2Q96AC6 838 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 TRIM43Q96BQ3 446 aaPredicted RBP14.3□□□□□ -0.12
GAPDH-202ENST00000396856 FAM122AQ96E09 287 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 OSBPL3Q9H4L5 887 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 SLC38A10Q9HBR0 1119 aa14.3□□□□□ -0.12
GAPDH-202ENST00000396856 REV3LO60673 3130 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 A0A0D9SFI3 127 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 ORC4O43929 436 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 STAT2P52630 851 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 EPHB4P54760 987 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 NUCB1Q02818 461 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 CTDSPL2Q05D32 466 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 ZNF792Q3KQV3 632 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 FAM160B2Q86V87 743 aa14.29□□□□□ -0.12
GAPDH-202ENST00000396856 MSL3Q8N5Y2 521 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms