RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ACLYP53396 1101 aa20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 PCSK9Q8NBP7 692 aaKnown RBP20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 MKNK2Q9HBH9 465 aa20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 SPC25Q9HBM1 224 aa20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 CTDP1Q9Y5B0 961 aaPredicted RBP20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 ELP1O95163 1332 aa20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 LTBP2Q14767 1821 aa20.97■□□□□ 0.95
EXOSC3-202ENST00000396521 F5H6K3 240 aa20.96■□□□□ 0.95
EXOSC3-202ENST00000396521 ZBED4O75132 1171 aa20.96■□□□□ 0.95
EXOSC3-202ENST00000396521 KLRC3Q07444 240 aa20.96■□□□□ 0.95
EXOSC3-202ENST00000396521 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.96■□□□□ 0.95
EXOSC3-202ENST00000396521 KLHDC9Q8NEP7 349 aa20.96■□□□□ 0.95
EXOSC3-202ENST00000396521 TTYH1Q9H313 450 aaPredicted RBP20.96■□□□□ 0.95
EXOSC3-202ENST00000396521 FBXO40Q9UH90 709 aa20.96■□□□□ 0.95
EXOSC3-202ENST00000396521 DNAJC25-GNG10A0A024R161 153 aa20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 FDX1P10109 184 aa20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 FOSL2P15408 326 aa20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 TAL1P17542 331 aaPredicted RBP20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 CST5P28325 142 aaPredicted RBP20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 FAAP100Q0VG06 881 aa20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 SNRNP48Q6IEG0 339 aaKnown RBP20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 GLT1D1Q96MS3 346 aa20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 LRRCC1Q9C099 1032 aa20.95■□□□□ 0.94
EXOSC3-202ENST00000396521 TIMP1P01033 207 aa20.94■□□□□ 0.94
EXOSC3-202ENST00000396521 ITGB8P26012 769 aa20.94■□□□□ 0.94
EXOSC3-202ENST00000396521 OAZ1P54368 228 aa20.94■□□□□ 0.94
EXOSC3-202ENST00000396521 MYLIPQ8WY64 445 aa20.94■□□□□ 0.94
EXOSC3-202ENST00000396521 STRBPQ96SI9 672 aaKnown RBP20.94■□□□□ 0.94
EXOSC3-202ENST00000396521 PUS7LQ9H0K6 701 aaKnown RBP20.94■□□□□ 0.94
EXOSC3-202ENST00000396521 ABHD16BQ9H3Z7 469 aa20.94■□□□□ 0.94
EXOSC3-202ENST00000396521 SYNRGQ9UMZ2 1314 aa20.94■□□□□ 0.94
EXOSC3-202ENST00000396521 VCANP13611 3396 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 GNAT2P19087 354 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 RASA1P20936 1047 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 KCNA10Q16322 511 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 SLFNL1Q499Z3 407 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 CCSAPQ6IQ19 270 aaPredicted RBP20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 CHST13Q8NET6 341 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 MKL1Q969V6 931 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 BCL11AQ9H165 835 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 FEM1BQ9UK73 627 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 COG6Q9Y2V7 657 aa20.93■□□□□ 0.94
EXOSC3-202ENST00000396521 SNAI1O95863 264 aaPredicted RBP20.92■□□□□ 0.94
EXOSC3-202ENST00000396521 ZFYP08048 801 aaPredicted RBP20.92■□□□□ 0.94
EXOSC3-202ENST00000396521 ACVR2BQ13705 512 aa20.92■□□□□ 0.94
EXOSC3-202ENST00000396521 MFSD5Q6N075 450 aa20.92■□□□□ 0.94
EXOSC3-202ENST00000396521 ZNF444Q8N0Y2 327 aaPredicted RBP20.92■□□□□ 0.94
EXOSC3-202ENST00000396521 GPATCH3Q96I76 525 aa20.92■□□□□ 0.94
EXOSC3-202ENST00000396521 TTC28Q96AY4 2481 aa20.92■□□□□ 0.94
EXOSC3-202ENST00000396521 GSG1L2A8MUP6 293 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 SMIM22K7EJ46 135 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 NDUFB10O96000 172 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 EPHB4P54760 987 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 PPIGQ13427 754 aaKnown RBP eCLIP20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 ANKRD35Q8N283 1001 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 KBTBD3Q8NAB2 608 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 SEZ6LQ9BYH1 1024 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 SLC38A10Q9HBR0 1119 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 ECHDC1Q9NTX5 307 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 ZHX1Q9UKY1 873 aaPredicted RBP20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 TBX21Q9UL17 535 aa20.91■□□□□ 0.94
EXOSC3-202ENST00000396521 SMCHD1A6NHR9 2005 aa20.9■□□□□ 0.94
EXOSC3-202ENST00000396521 DNAJB2P25686 324 aa20.9■□□□□ 0.94
EXOSC3-202ENST00000396521 CDK7P50613 346 aa20.9■□□□□ 0.94
EXOSC3-202ENST00000396521 APPBP2Q92624 585 aa20.9■□□□□ 0.94
EXOSC3-202ENST00000396521 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.9■□□□□ 0.94
EXOSC3-202ENST00000396521 CLIP2Q9UDT6 1046 aa20.9■□□□□ 0.94
EXOSC3-202ENST00000396521 A0A0U1RQG5 324 aaPredicted RBP20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 MINDY4BA8MYZ0 360 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 TTLL1O95922 423 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 C6orf222P0C671 652 aaPredicted RBP20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 GJA9P57773 515 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 NKX3-2P78367 333 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 PPP4R3BQ5MIZ7 849 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 CPXCR1Q8N123 301 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 TMEM199Q8N511 208 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 GMCL1P1Q8NEA9 526 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 NUP88Q99567 741 aaPredicted RBP20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 UPF3AQ9H1J1 476 aaKnown RBP20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 RIPK3Q9Y572 518 aa20.89■□□□□ 0.93
EXOSC3-202ENST00000396521 MYH8P13535 1937 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 ZNFX1Q9P2E3 1918 aaKnown RBP20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 IGKV6D-41A0A0C4DH26 115 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 ARVCFO00192 962 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 TLR3O15455 904 aaKnown RBP20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 ASGR1P07306 291 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 CCDC144BQ3MJ40 725 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 GNASQ5JWF2 1037 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 CCDC129Q6ZRS4 1044 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 VTI1AQ96AJ9 217 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 ZNF576Q9H609 170 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 MTMR4Q9NYA4 1195 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 PRUNE2Q8WUY3 3088 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 CDH23Q9H251 3354 aa20.88■□□□□ 0.93
EXOSC3-202ENST00000396521 RNF113AO15541 343 aaKnown RBP20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 CABYRO75952 493 aa20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 CHGBP05060 677 aa20.87■□□□□ 0.93
EXOSC3-202ENST00000396521 SLC3A2P08195 630 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms