RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
RTN1-203ENST00000395090 MINDY4BA8MYZ0 360 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 J3QL48 77 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 WDHD1O75717 1129 aaPredicted RBP13.42□□□□□ -0.26
RTN1-203ENST00000395090 LMNB1P20700 586 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 MCM5P33992 734 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 CUL4AQ13619 759 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 TOB2Q14106 344 aaPredicted RBP13.42□□□□□ -0.26
RTN1-203ENST00000395090 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 KRT23Q9C075 422 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 INCENPQ9NQS7 918 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 TOR4AQ9NXH8 423 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 LAMA4Q16363 1823 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 CYP2D7A0A087X1C5 515 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 RPS12P25398 132 aaKnown RBP13.42□□□□□ -0.26
RTN1-203ENST00000395090 NT5C2P49902 561 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 EVCP57679 992 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 ANTXR2P58335 489 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 PRR20EP86478 221 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 PRR20CP86479 221 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 PRR20DP86480 221 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 PRR20BP86481 221 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 PRR20AP86496 221 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 RALYLQ86SE5 291 aaKnown RBP13.42□□□□□ -0.26
RTN1-203ENST00000395090 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
RTN1-203ENST00000395090 MTA3Q9BTC8 594 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 IDI2Q9BXS1 227 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 MCM9Q9NXL9 1143 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 ZSWIM5Q9P217 1185 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 FLT1P17948 1338 aa13.42□□□□□ -0.26
RTN1-203ENST00000395090 SMIM22K7EJ46 135 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 CFAP100Q494V2 611 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 TRIM67Q6ZTA4 783 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 Q6ZUG5 572 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 CYP2U1Q7Z449 544 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 MAPKAPK5Q8IW41 473 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 TCEANC2Q96MN5 208 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 TPCN1Q9ULQ1 816 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 NEDD4P46934 1319 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 TIAM2Q8IVF5 1701 aa13.41□□□□□ -0.26
RTN1-203ENST00000395090 B4E1Z4 1266 aa13.4□□□□□ -0.26
RTN1-203ENST00000395090 ORC4O43929 436 aa13.4□□□□□ -0.26
RTN1-203ENST00000395090 BRD1O95696 1058 aa13.4□□□□□ -0.26
RTN1-203ENST00000395090 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
RTN1-203ENST00000395090 CYP2D6P10635 497 aa13.4□□□□□ -0.26
RTN1-203ENST00000395090 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
RTN1-203ENST00000395090 EIF6P56537 245 aaKnown RBP13.4□□□□□ -0.26
RTN1-203ENST00000395090 ZNF280AP59817 542 aaPredicted RBP13.4□□□□□ -0.26
RTN1-203ENST00000395090 SWI5Q1ZZU3 235 aa13.4□□□□□ -0.26
RTN1-203ENST00000395090 CYB5R4Q7L1T6 521 aa13.4□□□□□ -0.26
RTN1-203ENST00000395090 DPF2Q92785 391 aa13.4□□□□□ -0.26
RTN1-203ENST00000395090 INTS4Q96HW7 963 aaKnown RBP13.4□□□□□ -0.26
RTN1-203ENST00000395090 ZBED3Q96IU2 234 aaPredicted RBP13.4□□□□□ -0.26
RTN1-203ENST00000395090 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
RTN1-203ENST00000395090 SH2B1Q9NRF2 756 aaPredicted RBP13.4□□□□□ -0.26
RTN1-203ENST00000395090 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
RTN1-203ENST00000395090 BAZ2AQ9UIF9 1905 aaKnown RBP13.4□□□□□ -0.26
RTN1-203ENST00000395090 ROBO3Q96MS0 1386 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 PRC1O43663 620 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 DDIT3P35638 169 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 PLCD1P51178 756 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 RBM5P52756 815 aaKnown RBP eCLIP13.39□□□□□ -0.27
RTN1-203ENST00000395090 AMOTL1Q8IY63 956 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 IGDCC4Q8TDY8 1250 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 TMEM87BQ96K49 555 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 DDX4Q9NQI0 724 aaKnown RBP13.39□□□□□ -0.27
RTN1-203ENST00000395090 CDK5RAP2Q96SN8 1893 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 RGS20O76081 388 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 POLR3DP05423 398 aaPredicted RBP13.39□□□□□ -0.27
RTN1-203ENST00000395090 ADD1P35611 737 aaKnown RBP13.39□□□□□ -0.27
RTN1-203ENST00000395090 PDE4BQ07343 736 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 ME3Q16798 604 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 CHST3Q7LGC8 479 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 ESR2Q92731 530 aa13.39□□□□□ -0.27
RTN1-203ENST00000395090 NFIAQ12857 509 aa13.38□□□□□ -0.27
RTN1-203ENST00000395090 DLGAP5Q15398 846 aa13.38□□□□□ -0.27
RTN1-203ENST00000395090 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
RTN1-203ENST00000395090 BRF1Q92994 677 aa13.38□□□□□ -0.27
RTN1-203ENST00000395090 ZNF274Q96GC6 653 aaPredicted RBP13.38□□□□□ -0.27
RTN1-203ENST00000395090 LRRC2Q9BYS8 371 aa13.38□□□□□ -0.27
RTN1-203ENST00000395090 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
RTN1-203ENST00000395090 SAP30BPQ9UHR5 308 aaKnown RBP13.38□□□□□ -0.27
RTN1-203ENST00000395090 FOCADQ5VW36 1801 aa13.38□□□□□ -0.27
RTN1-203ENST00000395090 ENTPD3O75355 529 aa13.37□□□□□ -0.27
RTN1-203ENST00000395090 SMPD1P17405 629 aa13.37□□□□□ -0.27
RTN1-203ENST00000395090 LIFRP42702 1097 aa13.37□□□□□ -0.27
RTN1-203ENST00000395090 FGD1P98174 961 aa13.37□□□□□ -0.27
RTN1-203ENST00000395090 GABPAQ06546 454 aa13.37□□□□□ -0.27
RTN1-203ENST00000395090 FKBP1CQ5VVH2 108 aa13.37□□□□□ -0.27
RTN1-203ENST00000395090 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
RTN1-203ENST00000395090 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
RTN1-203ENST00000395090 CLP1Q92989 425 aaKnown RBP13.37□□□□□ -0.27
RTN1-203ENST00000395090 ITPKCQ96DU7 683 aa13.37□□□□□ -0.27
RTN1-203ENST00000395090 KLF16Q9BXK1 252 aaPredicted RBP13.37□□□□□ -0.27
RTN1-203ENST00000395090 TDRD3Q9H7E2 651 aaKnown RBP13.37□□□□□ -0.27
RTN1-203ENST00000395090 CWC22Q9HCG8 908 aaKnown RBP13.37□□□□□ -0.27
RTN1-203ENST00000395090 ANGEL1Q9UNK9 670 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms