RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 OLFML2BQ68BL8 750 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 TDHQ8IZJ6 230 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 ZNF444Q8N0Y2 327 aaPredicted RBP10.54□□□□□ -0.72
ATG4A-205ENST00000394892 ABRAQ8N0Z2 381 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 GMCL1P1Q8NEA9 526 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 MAML3Q96JK9 1138 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 SLF1Q9BQI6 1058 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 NACAP1Q9BZK3 213 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 MROH8Q9H579 483 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 SZT2Q5T011 3432 aa10.54□□□□□ -0.72
ATG4A-205ENST00000394892 MYH7P12883 1935 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 ORC4O43929 436 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 TTLL1O95922 423 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 SYN1P17600 705 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 SDSP20132 328 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 LRRC26Q2I0M4 334 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 MFSD14CQ5VZR4 134 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 ANO1Q5XXA6 986 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 SLFN13Q68D06 897 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 DPP9Q86TI2 863 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 TBC1D10CQ8IV04 446 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 SLC38A10Q9HBR0 1119 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 RAVER2Q9HCJ3 691 aaKnown RBP10.53□□□□□ -0.72
ATG4A-205ENST00000394892 DDX20Q9UHI6 824 aaKnown RBP10.53□□□□□ -0.72
ATG4A-205ENST00000394892 STXBP5LQ9Y2K9 1186 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 ZNF536O15090 1300 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 LAMA3Q16787 3333 aa10.53□□□□□ -0.72
ATG4A-205ENST00000394892 DNAJC25-GNG10A0A024R161 153 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 ATP2A1O14983 1001 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 SLC25A27O95847 323 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 TSPY3P0CV98 308 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 TSPY8P0CW00 308 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 GSPT1P15170 499 aaKnown RBP10.52□□□□□ -0.73
ATG4A-205ENST00000394892 MCCP23508 829 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 MAGEA10P43363 369 aaPredicted RBP10.52□□□□□ -0.73
ATG4A-205ENST00000394892 SNAP25P60880 206 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 HAND2P61296 217 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 PDE4BQ07343 736 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 RCSD1Q6JBY9 416 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 PRPF38AQ8NAV1 312 aaKnown RBP10.52□□□□□ -0.73
ATG4A-205ENST00000394892 KIFC2Q96AC6 838 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 SYNPO2Q9UMS6 1093 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 CCDC171Q6TFL3 1326 aa10.52□□□□□ -0.73
ATG4A-205ENST00000394892 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 TMEM232C9JQI7 657 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 SNAI1O95863 264 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-205ENST00000394892 ZNF865P0CJ78 1059 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-205ENST00000394892 FCER1AP12319 257 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 BMP3P12645 472 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-205ENST00000394892 SNRNP48Q6IEG0 339 aaKnown RBP10.51□□□□□ -0.73
ATG4A-205ENST00000394892 TTBK2Q6IQ55 1244 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 KCTD1Q719H9 257 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.51□□□□□ -0.73
ATG4A-205ENST00000394892 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 CPXCR1Q8N123 301 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 LENG1Q96BZ8 264 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-205ENST00000394892 GMCL1Q96IK5 515 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 MMP19Q99542 508 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 LBHD1Q9BQE6 289 aaPredicted RBP10.51□□□□□ -0.73
ATG4A-205ENST00000394892 TEX13BQ9BXU2 312 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 FEM1BQ9UK73 627 aa10.51□□□□□ -0.73
ATG4A-205ENST00000394892 DDX49Q9Y6V7 483 aaKnown RBP10.51□□□□□ -0.73
ATG4A-205ENST00000394892 ZNF236Q9UL36 1845 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 SEPT4O43236 478 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 ADCY6O43306 1168 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 RANBP6O60518 1105 aaKnown RBP10.5□□□□□ -0.73
ATG4A-205ENST00000394892 CNGA1P29973 690 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 GJC2Q5T442 439 aaPredicted RBP10.5□□□□□ -0.73
ATG4A-205ENST00000394892 AGBL1Q96MI9 1066 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 TINF2Q9BSI4 451 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 ZNF287Q9HBT7 754 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 ZBTB47Q9UFB7 747 aaPredicted RBP10.5□□□□□ -0.73
ATG4A-205ENST00000394892 PRKAG2Q9UGJ0 569 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 ASTN1O14525 1302 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 ZMYM6O95789 1325 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 NEDD4P46934 1319 aa10.5□□□□□ -0.73
ATG4A-205ENST00000394892 PARP14Q460N5 1801 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 TSPY2A6NKD2 308 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 PLA2G6O60733 806 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 SLC3A2P08195 630 aaKnown RBP10.49□□□□□ -0.73
ATG4A-205ENST00000394892 CNTN2Q02246 1040 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 CWC27Q6UX04 472 aaKnown RBP10.49□□□□□ -0.73
ATG4A-205ENST00000394892 Q7L0L9 218 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 STAG1Q8WVM7 1258 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 TMEM47Q9BQJ4 181 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 KATNBL1Q9H079 304 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 TCP11L1Q9NUJ3 509 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 MTMR10Q9NXD2 777 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 STX8Q9UNK0 236 aa10.49□□□□□ -0.73
ATG4A-205ENST00000394892 DIS3Q9Y2L1 958 aaKnown RBP10.49□□□□□ -0.73
ATG4A-205ENST00000394892 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
ATG4A-205ENST00000394892 SOWAHBA6NEL2 793 aa10.48□□□□□ -0.73
ATG4A-205ENST00000394892 MSCO60682 206 aa10.48□□□□□ -0.73
ATG4A-205ENST00000394892 ZBED4O75132 1171 aa10.48□□□□□ -0.73
ATG4A-205ENST00000394892 PTGS1P23219 599 aa10.48□□□□□ -0.73
ATG4A-205ENST00000394892 SLC16A2P36021 539 aa10.48□□□□□ -0.73
ATG4A-205ENST00000394892 SLC1A4P43007 532 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms