RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
SNX9-201ENST00000392185 TICAM2Q86XR7 235 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 ALS2CR12Q96Q35 445 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 DDX25Q9UHL0 483 aaKnown RBP18.47■□□□□ 0.55
SNX9-201ENST00000392185 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.47■□□□□ 0.55
SNX9-201ENST00000392185 UBE2SQ16763 222 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 TMTC3Q6ZXV5 915 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 PTF1AQ7RTS3 328 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 SP8Q8IXZ3 490 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 SMYD4Q8IYR2 804 aaPredicted RBP18.47■□□□□ 0.55
SNX9-201ENST00000392185 PAF1Q8N7H5 531 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 MRVI1Q9Y6F6 885 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 C3P01024 1663 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 PSDA5PKW4 1024 aaPredicted RBP18.47■□□□□ 0.55
SNX9-201ENST00000392185 PTPN21Q16825 1174 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 DPY19L2Q6NUT2 758 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 RTKN2Q8IZC4 609 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 CCPG1Q9ULG6 757 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
SNX9-201ENST00000392185 BMP3P12645 472 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 LRMPQ12912 555 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 TAOK3Q9H2K8 898 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 TSGA10IPQ3SY00 556 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 MYCT1Q8N699 235 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 EPSTI1Q96J88 318 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 USP17L5A8MUK1 530 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 CETN3O15182 167 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 ERLIN2O94905 339 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 RPL13P26373 211 aaKnown RBP18.46■□□□□ 0.55
SNX9-201ENST00000392185 KRT9P35527 623 aa18.46■□□□□ 0.55
SNX9-201ENST00000392185 FAM170AA1A519 330 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 GCOM1H8Y6P7 765 aaPredicted RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 POLR2MP0CAP2 368 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 RDXP35241 583 aaKnown RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 EXOSC10Q01780 885 aaKnown RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 TBC1D10BQ4KMP7 808 aaPredicted RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 RPAP1Q9BWH6 1393 aaPredicted RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 CDR1P51861 262 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 CASP7P55210 303 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 SEPT2Q15019 361 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 RDH13Q8NBN7 331 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 VTI1AQ96AJ9 217 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 ZFP91Q96JP5 570 aaPredicted RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 SENP2Q9HC62 589 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 ABCC12Q96J65 1359 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 KIF5AQ12840 1032 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 GALNT17Q6IS24 598 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 TXNRD3Q86VQ6 643 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 CLEC10AQ8IUN9 316 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 CNGA4Q8IV77 575 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 EPB41L4AQ9HCS5 686 aaPredicted RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 GCNT3O95395 438 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 GPBP1Q86WP2 473 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 CTNNBL1Q8WYA6 563 aaPredicted RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 SLC39A2Q9NP94 309 aa18.45■□□□□ 0.54
SNX9-201ENST00000392185 MRPL11Q9Y3B7 192 aaKnown RBP18.45■□□□□ 0.54
SNX9-201ENST00000392185 C11orf57Q6ZUT1 292 aaPredicted RBP18.44■□□□□ 0.54
SNX9-201ENST00000392185 TBC1D5Q92609 795 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 LONRF3Q496Y0 759 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 PLA2G4DQ86XP0 818 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 FOXP4Q8IVH2 680 aaPredicted RBP18.44■□□□□ 0.54
SNX9-201ENST00000392185 IVNS1ABPQ9Y6Y0 642 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 ADGRB2O60241 1585 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 PNPLA7Q6ZV29 1317 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 PPP6R2O75170 966 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 ZNF569Q5MCW4 686 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 PAXBP1Q9Y5B6 917 aa18.44■□□□□ 0.54
SNX9-201ENST00000392185 GUCY1A2P33402 732 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 MRPL44Q9H9J2 332 aaKnown RBP18.43■□□□□ 0.54
SNX9-201ENST00000392185 GYS1P13807 737 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 ADKP55263 362 aaKnown RBP18.43■□□□□ 0.54
SNX9-201ENST00000392185 GTPBP4Q9BZE4 634 aaKnown RBP18.43■□□□□ 0.54
SNX9-201ENST00000392185 SALL3Q9BXA9 1300 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 BCL9O00512 1426 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 GADL1Q6ZQY3 521 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 FBXO33Q7Z6M2 555 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 USP37Q86T82 979 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 NLRX1Q86UT6 975 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 CRAMP1Q96RY5 1269 aa18.43■□□□□ 0.54
SNX9-201ENST00000392185 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.42■□□□□ 0.54
SNX9-201ENST00000392185 DCPSQ96C86 337 aaKnown RBP18.42■□□□□ 0.54
SNX9-201ENST00000392185 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
SNX9-201ENST00000392185 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
SNX9-201ENST00000392185 PRIMPOLQ96LW4 560 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 CRACR2AQ9BSW2 395 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 SCAF8Q9UPN6 1271 aaKnown RBP18.42■□□□□ 0.54
SNX9-201ENST00000392185 ATP6V0A2Q9Y487 856 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 HOXA13P31271 388 aaPredicted RBP18.42■□□□□ 0.54
SNX9-201ENST00000392185 HLTFQ14527 1009 aaKnown RBP eCLIP18.42■□□□□ 0.54
SNX9-201ENST00000392185 C12orf60Q5U649 245 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 STAG2Q8N3U4 1231 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 NT5C3AQ9H0P0 336 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 KIAA1024Q9UPX6 916 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 FRMD4BQ9Y2L6 1034 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 DAGLAQ9Y4D2 1042 aa18.42■□□□□ 0.54
SNX9-201ENST00000392185 PCDHB13Q9Y5F0 798 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms