RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 ERLIN1O75477 346 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 PRDX5P30044 214 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 C10orf67Q8IYJ2 551 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 TRIM47Q96LD4 638 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 RBM28Q9NW13 759 aaKnown RBP23.61■■□□□ 1.37
COL23A1-201ENST00000390654 DUSP10Q9Y6W6 482 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 B4DLN1 442 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 ATP1A1P05023 1023 aaKnown RBP23.61■■□□□ 1.37
COL23A1-201ENST00000390654 CAVIN4Q5BKX8 364 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 CCDC122Q5T0U0 273 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 ZNF658Q5TYW1 1059 aaPredicted RBP23.61■■□□□ 1.37
COL23A1-201ENST00000390654 PTF1AQ7RTS3 328 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 TMEM60Q9H2L4 133 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 AGPAT5Q9NUQ2 364 aa23.61■■□□□ 1.37
COL23A1-201ENST00000390654 GNL3LQ9NVN8 582 aaKnown RBP23.61■■□□□ 1.37
COL23A1-201ENST00000390654 NKRFO15226 690 aaKnown RBP eCLIP23.6■■□□□ 1.37
COL23A1-201ENST00000390654 CYP27A1Q02318 531 aa23.6■■□□□ 1.37
COL23A1-201ENST00000390654 TYW1BQ6NUM6 668 aa23.6■■□□□ 1.37
COL23A1-201ENST00000390654 RIN2Q8WYP3 895 aaPredicted RBP23.6■■□□□ 1.37
COL23A1-201ENST00000390654 COL1A1P02452 1464 aaPredicted RBP23.6■■□□□ 1.37
COL23A1-201ENST00000390654 FAM193AP78312 1265 aa23.6■■□□□ 1.37
COL23A1-201ENST00000390654 TAF1P21675 1872 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 ZNF185O15231 689 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 INF2Q27J81 1249 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 HPS3Q969F9 1004 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 MMS19Q96T76 1030 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 ANAPC4Q9UJX5 808 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 LUC7L2Q9Y383 392 aaKnown RBP23.59■■□□□ 1.37
COL23A1-201ENST00000390654 COL4A1P02462 1669 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 BMP15O95972 392 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 USP17L8P0C7I0 530 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 MECOMQ03112 1051 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 DYNLL2Q96FJ2 89 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 FAM84BQ96KN1 310 aaPredicted RBP23.59■■□□□ 1.37
COL23A1-201ENST00000390654 DRC1Q96MC2 740 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 SRP68Q9UHB9 627 aaKnown RBP23.59■■□□□ 1.37
COL23A1-201ENST00000390654 ITGB4P16144 1822 aa23.59■■□□□ 1.37
COL23A1-201ENST00000390654 MACROD2A1Z1Q3 448 aa23.58■■□□□ 1.37
COL23A1-201ENST00000390654 MSANTD4Q8NCY6 345 aa23.58■■□□□ 1.37
COL23A1-201ENST00000390654 GOLGA8HP0CJ92 632 aa23.58■■□□□ 1.37
COL23A1-201ENST00000390654 KIAA1328Q86T90 577 aa23.58■■□□□ 1.37
COL23A1-201ENST00000390654 CCDC51Q96ER9 411 aa23.58■■□□□ 1.37
COL23A1-201ENST00000390654 GPR101Q96P66 508 aaPredicted RBP23.58■■□□□ 1.37
COL23A1-201ENST00000390654 MCM9Q9NXL9 1143 aa23.58■■□□□ 1.37
COL23A1-201ENST00000390654 RAB21Q9UL25 225 aa23.58■■□□□ 1.37
COL23A1-201ENST00000390654 SEMA3EO15041 775 aa23.58■■□□□ 1.36
COL23A1-201ENST00000390654 RCAN1P53805 252 aa23.58■■□□□ 1.36
COL23A1-201ENST00000390654 DCP1AQ9NPI6 582 aaPredicted RBP23.58■■□□□ 1.36
COL23A1-201ENST00000390654 HSP90B2PQ58FF3 399 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 OR8K1Q8NGG5 319 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 MINPP1Q9UNW1 487 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 XIRP1Q702N8 1843 aaKnown RBP23.57■■□□□ 1.36
COL23A1-201ENST00000390654 ITIH6Q6UXX5 1313 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 PPP2R5BQ15173 497 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 FKBP15Q5T1M5 1219 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 HEATR3Q7Z4Q2 680 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 MB21D1Q8N884 522 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 PSMB7Q99436 277 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 TRIM34Q9BYJ4 488 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 LACRTQ9GZZ8 138 aa23.57■■□□□ 1.36
COL23A1-201ENST00000390654 RCCD1A6NED2 376 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 LRRC10BA6NIK2 292 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 TRIM21P19474 475 aaKnown RBP23.56■■□□□ 1.36
COL23A1-201ENST00000390654 PIP4K2BP78356 416 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 TSR1Q2NL82 804 aaKnown RBP23.56■■□□□ 1.36
COL23A1-201ENST00000390654 TXNRD3Q86VQ6 643 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 BLIDQ8IZY5 108 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 EXOC4Q96A65 974 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 CALM1P0DP23 149 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 CALM2P0DP24 149 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 CALM3P0DP25 149 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 UBA7P41226 1012 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 HERVK_113P62684 666 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 SPAG1Q07617 926 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 PFKFB3Q16875 520 aaPredicted RBP23.56■■□□□ 1.36
COL23A1-201ENST00000390654 PARP10Q53GL7 1025 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 NAALADL2Q58DX5 795 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 SMCR8Q8TEV9 937 aaPredicted RBP23.56■■□□□ 1.36
COL23A1-201ENST00000390654 LRRC15Q8TF66 581 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 MTA3Q9BTC8 594 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 CCDC194A0A1B0GVG4 234 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 USP17L3A6NCW0 530 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 USP17L4A6NCW7 530 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 EIF3JO75822 258 aaKnown RBP23.56■■□□□ 1.36
COL23A1-201ENST00000390654 TFAP4Q01664 338 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 WHAMMP3Q1A5X7 153 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 CCDC178Q5BJE1 867 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 WDR59Q6PJI9 974 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 USP17L1Q7RTZ2 530 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 DISC1Q9NRI5 854 aa23.56■■□□□ 1.36
COL23A1-201ENST00000390654 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.56■■□□□ 1.36
COL23A1-201ENST00000390654 AMPD2Q01433 879 aa23.55■■□□□ 1.36
COL23A1-201ENST00000390654 DTHD1Q6ZMT9 781 aa23.55■■□□□ 1.36
COL23A1-201ENST00000390654 CAGE1Q8TC20 777 aa23.55■■□□□ 1.36
COL23A1-201ENST00000390654 DDAH1O94760 285 aa23.55■■□□□ 1.36
COL23A1-201ENST00000390654 HNRNPLLQ8WVV9 542 aaKnown RBP23.55■■□□□ 1.36
COL23A1-201ENST00000390654 NSUN4Q96CB9 384 aaKnown RBP23.55■■□□□ 1.36
COL23A1-201ENST00000390654 TULP2O00295 520 aa23.54■■□□□ 1.36
COL23A1-201ENST00000390654 LEKR1Q6ZMV7 388 aa23.54■■□□□ 1.36
COL23A1-201ENST00000390654 KRT26Q7Z3Y9 468 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms