RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 STAT2P52630 851 aa25.9■■□□□ 1.74
IGHV3-20-201ENST00000390606 CASC1Q6TDU7 716 aa25.9■■□□□ 1.74
IGHV3-20-201ENST00000390606 NCAPG2Q86XI2 1143 aa25.9■■□□□ 1.74
IGHV3-20-201ENST00000390606 CHURC1Q8WUH1 139 aa25.9■■□□□ 1.74
IGHV3-20-201ENST00000390606 IVNS1ABPQ9Y6Y0 642 aa25.9■■□□□ 1.74
IGHV3-20-201ENST00000390606 TNKSO95271 1327 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 CENPFP49454 3210 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 POTEFA5A3E0 1075 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 ATP2A1O14983 1001 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 SLC25A27O95847 323 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 MYCP01106 439 aaPredicted RBP25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 INHAP05111 366 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 SNHG28P0DPA3 235 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 RGS2P41220 211 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 TRDNQ13061 729 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 NECTIN1Q15223 517 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 TRIB2Q92519 343 aa25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 BIN2Q9UBW5 565 aaPredicted RBP25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 ISY1Q9ULR0 285 aaKnown RBP25.89■■□□□ 1.74
IGHV3-20-201ENST00000390606 SLC27A2O14975 620 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 STRNO43815 780 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 ZBED4O75132 1171 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 UBXN2AP68543 259 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 SEC23AQ15436 765 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 CCDC96Q2M329 555 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 TTBK2Q6IQ55 1244 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 APBA2Q99767 749 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 TEX13BQ9BXU2 312 aa25.88■■□□□ 1.73
IGHV3-20-201ENST00000390606 HMGCRP04035 888 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 HOXC6P09630 235 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 FDX1P10109 184 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 BTNL9Q6UXG8 535 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 ABRAQ8N0Z2 381 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 NCOA7Q8NI08 942 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 UBAC1Q9BSL1 405 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 RAVER2Q9HCJ3 691 aaKnown RBP25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 PRR12Q9ULL5 1215 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 RIPK3Q9Y572 518 aa25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 FRMPD2Q68DX3 1309 aaPredicted RBP25.87■■□□□ 1.73
IGHV3-20-201ENST00000390606 ADORA2AP29274 412 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 COPB2P35606 906 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 ZNF543Q08ER8 600 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 IKQ13123 557 aaPredicted RBP25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 CCL14Q16627 93 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 CREB3L3Q68CJ9 461 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 SNRNP48Q6IEG0 339 aaKnown RBP25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 CPXCR1Q8N123 301 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 PNMA1Q8ND90 353 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 NPLOC4Q8TAT6 608 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 TMEM106CQ9BVX2 250 aa25.86■■□□□ 1.73
IGHV3-20-201ENST00000390606 CCL5P13501 91 aa25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 OAZ1P54368 228 aa25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 TRIM32Q13049 653 aa25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 RALYLQ86SE5 291 aaKnown RBP25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 MB21D2Q8IYB1 491 aaPredicted RBP25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 UNC93B1Q9H1C4 597 aa25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 KAT14Q9H8E8 782 aa25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 GPCPD1Q9NPB8 672 aa25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 ZNF236Q9UL36 1845 aa25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 ZNF536O15090 1300 aa25.85■■□□□ 1.73
IGHV3-20-201ENST00000390606 RBBP6Q7Z6E9 1792 aaKnown RBP25.84■■□□□ 1.73
IGHV3-20-201ENST00000390606 COBLO75128 1261 aa25.84■■□□□ 1.73
IGHV3-20-201ENST00000390606 SLC16A2P36021 539 aa25.84■■□□□ 1.73
IGHV3-20-201ENST00000390606 ANTXR2P58335 489 aa25.84■■□□□ 1.73
IGHV3-20-201ENST00000390606 TRMT44Q8IYL2 757 aaKnown RBP25.84■■□□□ 1.73
IGHV3-20-201ENST00000390606 CTDP1Q9Y5B0 961 aaPredicted RBP25.84■■□□□ 1.73
IGHV3-20-201ENST00000390606 IGHA2P01877 340 aa25.83■■□□□ 1.73
IGHV3-20-201ENST00000390606 FCER1AP12319 257 aa25.83■■□□□ 1.73
IGHV3-20-201ENST00000390606 ZKSCAN1P17029 563 aaPredicted RBP25.83■■□□□ 1.73
IGHV3-20-201ENST00000390606 IFIT1BQ5T764 474 aaKnown RBP25.83■■□□□ 1.73
IGHV3-20-201ENST00000390606 MAP3K21Q5TCX8 1036 aa25.83■■□□□ 1.73
IGHV3-20-201ENST00000390606 FLRT1Q9NZU1 646 aa25.83■■□□□ 1.73
IGHV3-20-201ENST00000390606 EN2P19622 333 aaPredicted RBP25.82■■□□□ 1.72
IGHV3-20-201ENST00000390606 SNAP25P60880 206 aa25.82■■□□□ 1.72
IGHV3-20-201ENST00000390606 COL9A3Q14050 684 aaPredicted RBP25.82■■□□□ 1.72
IGHV3-20-201ENST00000390606 SYDE2Q5VT97 1194 aa25.82■■□□□ 1.72
IGHV3-20-201ENST00000390606 RNF208Q9H0X6 261 aa25.82■■□□□ 1.72
IGHV3-20-201ENST00000390606 IFIT3O14879 490 aaKnown RBP25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 GJB1P08034 283 aa25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 GPATCH4Q5T3I0 446 aaKnown RBP25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 CHST3Q7LGC8 479 aa25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 DPP9Q86TI2 863 aa25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 MMP19Q99542 508 aa25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 RANBP17Q9H2T7 1088 aaKnown RBP25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 SENP2Q9HC62 589 aa25.81■■□□□ 1.72
IGHV3-20-201ENST00000390606 GOLGA8HP0CJ92 632 aa25.8■■□□□ 1.72
IGHV3-20-201ENST00000390606 AGBL1Q96MI9 1066 aa25.8■■□□□ 1.72
IGHV3-20-201ENST00000390606 PAK6Q9NQU5 681 aaPredicted RBP25.8■■□□□ 1.72
IGHV3-20-201ENST00000390606 SLC4A3P48751 1232 aa25.79■■□□□ 1.72
IGHV3-20-201ENST00000390606 KCTD2Q14681 263 aa25.79■■□□□ 1.72
IGHV3-20-201ENST00000390606 CCDC174Q6PII3 467 aa25.79■■□□□ 1.72
IGHV3-20-201ENST00000390606 CHST13Q8NET6 341 aa25.79■■□□□ 1.72
IGHV3-20-201ENST00000390606 IGDCC4Q8TDY8 1250 aa25.79■■□□□ 1.72
IGHV3-20-201ENST00000390606 PRKAR2AP13861 404 aaKnown RBP25.78■■□□□ 1.72
IGHV3-20-201ENST00000390606 CACNB2Q08289 660 aaPredicted RBP25.78■■□□□ 1.72
IGHV3-20-201ENST00000390606 RNF20Q5VTR2 975 aa25.78■■□□□ 1.72
IGHV3-20-201ENST00000390606 OLFML2BQ68BL8 750 aa25.78■■□□□ 1.72
IGHV3-20-201ENST00000390606 SHISA4Q96DD7 197 aa25.78■■□□□ 1.72
IGHV3-20-201ENST00000390606 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms