RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 TRIM60Q495X7 471 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 MSL3Q8N5Y2 521 aaKnown RBP31.45■■■□□ 2.63
NPHP3-202ENST00000383282 SLC17A8Q8NDX2 589 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 PI4K2BQ8TCG2 481 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 FERMT2Q96AC1 680 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 NAPBQ9H115 298 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 PRDM5Q9NQX1 630 aaPredicted RBP31.45■■■□□ 2.63
NPHP3-202ENST00000383282 ZBTB47Q9UFB7 747 aaPredicted RBP31.45■■■□□ 2.63
NPHP3-202ENST00000383282 FEM1BQ9UK73 627 aa31.45■■■□□ 2.63
NPHP3-202ENST00000383282 ATP2A1O14983 1001 aa31.44■■■□□ 2.62
NPHP3-202ENST00000383282 SLC4A3P48751 1232 aa31.44■■■□□ 2.62
NPHP3-202ENST00000383282 SNX17Q15036 470 aa31.44■■■□□ 2.62
NPHP3-202ENST00000383282 Q7L0L9 218 aa31.44■■■□□ 2.62
NPHP3-202ENST00000383282 CPXCR1Q8N123 301 aa31.44■■■□□ 2.62
NPHP3-202ENST00000383282 KIFC2Q96AC6 838 aa31.44■■■□□ 2.62
NPHP3-202ENST00000383282 SEC62Q99442 399 aaKnown RBP31.44■■■□□ 2.62
NPHP3-202ENST00000383282 MX1P20591 662 aa31.43■■■□□ 2.62
NPHP3-202ENST00000383282 C1orf53Q5VUE5 145 aa31.43■■■□□ 2.62
NPHP3-202ENST00000383282 PHF24Q9UPV7 400 aa31.43■■■□□ 2.62
NPHP3-202ENST00000383282 RIPK3Q9Y572 518 aa31.43■■■□□ 2.62
NPHP3-202ENST00000383282 ZNFX1Q9P2E3 1918 aaKnown RBP31.42■■■□□ 2.62
NPHP3-202ENST00000383282 ZNF865P0CJ78 1059 aaPredicted RBP31.42■■■□□ 2.62
NPHP3-202ENST00000383282 TAL1P17542 331 aaPredicted RBP31.42■■■□□ 2.62
NPHP3-202ENST00000383282 LRRC47Q8N1G4 583 aaKnown RBP31.42■■■□□ 2.62
NPHP3-202ENST00000383282 GMCL1P1Q8NEA9 526 aa31.42■■■□□ 2.62
NPHP3-202ENST00000383282 NEDD1Q8NHV4 660 aa31.42■■■□□ 2.62
NPHP3-202ENST00000383282 PLIN4Q96Q06 1357 aa31.42■■■□□ 2.62
NPHP3-202ENST00000383282 PGK1P00558 417 aa31.41■■■□□ 2.62
NPHP3-202ENST00000383282 PPARAQ07869 468 aa31.41■■■□□ 2.62
NPHP3-202ENST00000383282 ZMYM1Q5SVZ6 1142 aa31.41■■■□□ 2.62
NPHP3-202ENST00000383282 OTUD7AQ8TE49 926 aaPredicted RBP31.41■■■□□ 2.62
NPHP3-202ENST00000383282 SLC38A10Q9HBR0 1119 aa31.41■■■□□ 2.62
NPHP3-202ENST00000383282 RAVER2Q9HCJ3 691 aaKnown RBP31.41■■■□□ 2.62
NPHP3-202ENST00000383282 FBXO40Q9UH90 709 aa31.41■■■□□ 2.62
NPHP3-202ENST00000383282 SYNGAP1Q96PV0 1343 aa31.41■■■□□ 2.62
NPHP3-202ENST00000383282 PPP4R3BQ5MIZ7 849 aa31.4■■■□□ 2.62
NPHP3-202ENST00000383282 SLFN13Q68D06 897 aa31.4■■■□□ 2.62
NPHP3-202ENST00000383282 ISY1Q9ULR0 285 aaKnown RBP31.4■■■□□ 2.62
NPHP3-202ENST00000383282 BMP3P12645 472 aa31.39■■■□□ 2.62
NPHP3-202ENST00000383282 TFAP4Q01664 338 aa31.39■■■□□ 2.62
NPHP3-202ENST00000383282 PDLIM7Q9NR12 457 aa31.39■■■□□ 2.62
NPHP3-202ENST00000383282 MTMR10Q9NXD2 777 aa31.39■■■□□ 2.62
NPHP3-202ENST00000383282 FAM184BQ9ULE4 1060 aa31.39■■■□□ 2.62
NPHP3-202ENST00000383282 FDX1P10109 184 aa31.38■■■□□ 2.61
NPHP3-202ENST00000383282 OAZ1P54368 228 aa31.38■■■□□ 2.61
NPHP3-202ENST00000383282 MAMDC4Q6UXC1 1216 aa31.38■■■□□ 2.61
NPHP3-202ENST00000383282 ZNF467Q7Z7K2 595 aaPredicted RBP31.38■■■□□ 2.61
NPHP3-202ENST00000383282 ANKRD35Q8N283 1001 aa31.38■■■□□ 2.61
NPHP3-202ENST00000383282 CHST13Q8NET6 341 aa31.38■■■□□ 2.61
NPHP3-202ENST00000383282 ZHX1Q9UKY1 873 aaPredicted RBP31.38■■■□□ 2.61
NPHP3-202ENST00000383282 STXBP5LQ9Y2K9 1186 aa31.38■■■□□ 2.61
NPHP3-202ENST00000383282 DNAJC25-GNG10A0A024R161 153 aa31.37■■■□□ 2.61
NPHP3-202ENST00000383282 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.37■■■□□ 2.61
NPHP3-202ENST00000383282 PLXNA1Q9UIW2 1896 aa31.37■■■□□ 2.61
NPHP3-202ENST00000383282 BADQ92934 168 aa31.36■■■□□ 2.61
NPHP3-202ENST00000383282 TSEN34Q9BSV6 310 aaKnown RBP31.36■■■□□ 2.61
NPHP3-202ENST00000383282 TACC3Q9Y6A5 838 aa31.36■■■□□ 2.61
NPHP3-202ENST00000383282 MYH4Q9Y623 1939 aa31.36■■■□□ 2.61
NPHP3-202ENST00000383282 A0A1W2PQ45 241 aaPredicted RBP31.35■■■□□ 2.61
NPHP3-202ENST00000383282 A0A1W2PQY0 241 aa31.35■■■□□ 2.61
NPHP3-202ENST00000383282 SNAI1O95863 264 aaPredicted RBP31.35■■■□□ 2.61
NPHP3-202ENST00000383282 STAT2P52630 851 aa31.35■■■□□ 2.61
NPHP3-202ENST00000383282 RRP1P56182 461 aaKnown RBP31.35■■■□□ 2.61
NPHP3-202ENST00000383282 TLE2Q04725 743 aa31.35■■■□□ 2.61
NPHP3-202ENST00000383282 IKQ13123 557 aaPredicted RBP31.35■■■□□ 2.61
NPHP3-202ENST00000383282 CHURC1Q8WUH1 139 aa31.35■■■□□ 2.61
NPHP3-202ENST00000383282 LENG1Q96BZ8 264 aaPredicted RBP31.35■■■□□ 2.61
NPHP3-202ENST00000383282 COL6A3P12111 3177 aa31.35■■■□□ 2.61
NPHP3-202ENST00000383282 TSPY2A6NKD2 308 aa31.34■■■□□ 2.61
NPHP3-202ENST00000383282 TMEM232C9JQI7 657 aa31.34■■■□□ 2.61
NPHP3-202ENST00000383282 ADAMTS4O75173 837 aa31.34■■■□□ 2.61
NPHP3-202ENST00000383282 SLC1A4P43007 532 aa31.34■■■□□ 2.61
NPHP3-202ENST00000383282 ANKRD45Q5TZF3 282 aa31.34■■■□□ 2.61
NPHP3-202ENST00000383282 FAM109BQ6ICB4 259 aaPredicted RBP31.34■■■□□ 2.61
NPHP3-202ENST00000383282 FAM160B2Q86V87 743 aa31.34■■■□□ 2.61
NPHP3-202ENST00000383282 NUP133Q8WUM0 1156 aa31.34■■■□□ 2.61
NPHP3-202ENST00000383282 SMCHD1A6NHR9 2005 aa31.34■■■□□ 2.61
NPHP3-202ENST00000383282 TRIM43BA6NCK2 446 aa31.33■■■□□ 2.61
NPHP3-202ENST00000383282 CLTBP09497 229 aa31.33■■■□□ 2.61
NPHP3-202ENST00000383282 SH3RF1Q7Z6J0 888 aa31.33■■■□□ 2.61
NPHP3-202ENST00000383282 TRIM43Q96BQ3 446 aaPredicted RBP31.33■■■□□ 2.61
NPHP3-202ENST00000383282 GMCL1Q96IK5 515 aa31.33■■■□□ 2.61
NPHP3-202ENST00000383282 LTBP2Q14767 1821 aa31.33■■■□□ 2.61
NPHP3-202ENST00000383282 SYNRGQ9UMZ2 1314 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 MOXD2PA6NHM9 499 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 ACVR2BQ13705 512 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 SHHQ15465 462 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 CCDC129Q6ZRS4 1044 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 EVI5LQ96CN4 794 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 ABHD16BQ9H3Z7 469 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 STARD7Q9NQZ5 370 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 HOMER2Q9NSB8 354 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.32■■■□□ 2.6
NPHP3-202ENST00000383282 STX8Q9UNK0 236 aa31.32■■■□□ 2.6
NPHP3-202ENST00000383282 SALL3Q9BXA9 1300 aa31.31■■■□□ 2.6
NPHP3-202ENST00000383282 POTEB2H3BUK9 544 aa31.31■■■□□ 2.6
NPHP3-202ENST00000383282 PQBP1O60828 265 aaKnown RBP31.31■■■□□ 2.6
NPHP3-202ENST00000383282 DUSP11O75319 330 aaKnown RBP31.31■■■□□ 2.6
NPHP3-202ENST00000383282 STAG1Q8WVM7 1258 aa31.31■■■□□ 2.6
NPHP3-202ENST00000383282 ACAD9Q9H845 621 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms