RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 STXBP3O00186 592 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
PUDP-201ENST00000381077 TUBB4BP68371 445 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 SLC27A3Q5K4L6 730 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 PTF1AQ7RTS3 328 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 NOC3LQ8WTT2 800 aaKnown RBP14.3□□□□□ -0.12
PUDP-201ENST00000381077 CRAMP1Q96RY5 1269 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 TMEM47Q9BQJ4 181 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 PCDHA6Q9UN73 950 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 PCDHA8Q9Y5H6 950 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 SNED1Q8TER0 1413 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 KLRG2A4D1S0 409 aaPredicted RBP14.3□□□□□ -0.12
PUDP-201ENST00000381077 RPN1P04843 607 aaKnown RBP14.3□□□□□ -0.12
PUDP-201ENST00000381077 CCDC175P0C221 793 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 WWC2Q6AWC2 1192 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 FAM196AQ6ZSG2 479 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 TGFBRAP1Q8WUH2 860 aa14.3□□□□□ -0.12
PUDP-201ENST00000381077 DDX41Q9UJV9 622 aaKnown RBP14.3□□□□□ -0.12
PUDP-201ENST00000381077 EFCAB8A8MWE9 144 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 STAT6P42226 847 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 BTDP43251 543 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 STIM1Q13586 685 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 IL17AQ16552 155 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 IGSF22Q8N9C0 903 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
PUDP-201ENST00000381077 C6orf50Q9HD87 102 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 LTBP1Q14766 1721 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 EVX2Q03828 476 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 COBLL1Q53SF7 1204 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
PUDP-201ENST00000381077 STAG2Q8N3U4 1231 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 CCDC47Q96A33 483 aaKnown RBP14.29□□□□□ -0.12
PUDP-201ENST00000381077 EYA3Q99504 573 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 KBTBD4Q9NVX7 518 aa14.29□□□□□ -0.12
PUDP-201ENST00000381077 CYTH3O43739 400 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 MFAP3LO75121 409 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 UFL1O94874 794 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 RHOBTB3O94955 611 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 PARP1P09874 1014 aaKnown RBP14.28□□□□□ -0.12
PUDP-201ENST00000381077 CDK8P49336 464 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 GPSM2P81274 684 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 QSER1Q2KHR3 1735 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 RRAGBQ5VZM2 374 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 AMIGO3Q86WK7 504 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 TMTC1Q8IUR5 882 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 TEX11Q8IYF3 940 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 DYNLL2Q96FJ2 89 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 MTRQ99707 1265 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 MYH1P12882 1939 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 FLT1P17948 1338 aa14.28□□□□□ -0.12
PUDP-201ENST00000381077 KLRF2D3W0D1 207 aa14.27□□□□□ -0.12
PUDP-201ENST00000381077 H2AFXP16104 143 aaPredicted RBP14.27□□□□□ -0.12
PUDP-201ENST00000381077 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.12
PUDP-201ENST00000381077 UBA7P41226 1012 aa14.27□□□□□ -0.12
PUDP-201ENST00000381077 NONOQ15233 471 aaKnown RBP eCLIP14.27□□□□□ -0.12
PUDP-201ENST00000381077 DIXDC1Q155Q3 683 aa14.27□□□□□ -0.12
PUDP-201ENST00000381077 KLHL10Q6JEL2 608 aa14.27□□□□□ -0.12
PUDP-201ENST00000381077 RRP36Q96EU6 259 aaKnown RBP14.27□□□□□ -0.12
PUDP-201ENST00000381077 ARGLU1Q9NWB6 273 aaPredicted RBP14.27□□□□□ -0.12
PUDP-201ENST00000381077 CTNND2Q9UQB3 1225 aa14.27□□□□□ -0.12
PUDP-201ENST00000381077 PARP3Q9Y6F1 533 aa14.27□□□□□ -0.12
PUDP-201ENST00000381077 A0A1W2PQC6 194 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 GYS1P13807 737 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 CASQ1P31415 396 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 RHBDL3P58872 404 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 FAM193AP78312 1265 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 RASGRP2Q7LDG7 609 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 THAP9Q9H5L6 903 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 MYO1AQ9UBC5 1043 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.13
PUDP-201ENST00000381077 STX8Q9UNK0 236 aa14.27□□□□□ -0.13
PUDP-201ENST00000381077 TTF2Q9UNY4 1162 aaKnown RBP14.27□□□□□ -0.13
PUDP-201ENST00000381077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.26□□□□□ -0.13
PUDP-201ENST00000381077 SERPINB2P05120 415 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 ADKP55263 362 aaKnown RBP14.26□□□□□ -0.13
PUDP-201ENST00000381077 MAP3K9P80192 1104 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 ELF2Q15723 593 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 ASPRV1Q53RT3 343 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 TCP11X2Q5H9J9 407 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 UTP14CQ5TAP6 766 aaKnown RBP14.26□□□□□ -0.13
PUDP-201ENST00000381077 TYW1BQ6NUM6 668 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 PPP1R18Q6NYC8 613 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 SMIM5Q71RC9 77 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 HEATR3Q7Z4Q2 680 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 MNS1Q8NEH6 495 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.13
PUDP-201ENST00000381077 IQCDQ96DY2 449 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 DHTKD1Q96HY7 919 aaPredicted RBP14.26□□□□□ -0.13
PUDP-201ENST00000381077 UBAP1LF5GYI3 381 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 PSMA7O14818 248 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 TEX33O43247 280 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 ATP8B1O43520 1251 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 OR52Z1P0C646 297 aa14.26□□□□□ -0.13
PUDP-201ENST00000381077 VEGFAP15692 232 aaPredicted RBP14.26□□□□□ -0.13
PUDP-201ENST00000381077 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms