RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SAMSN1Q9NSI8 373 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 NFE2L3Q9Y4A8 694 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 ADAMTSL1Q8N6G6 1762 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 PALM3A6NDB9 673 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 F8W031 263 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 M0R2N6 131 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 RRP9O43818 475 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 E4F1Q66K89 784 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 HEATR3Q7Z4Q2 680 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 CCAR2Q8N163 923 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 PCDHA4Q9UN74 947 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 GAKO14976 1311 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 PPEF1O14829 653 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 BMP15O95972 392 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 ZNF18P17022 549 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 SFPQP23246 707 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 DPYDQ12882 1025 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 VSTM4Q8IW00 320 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 ZNF592Q92610 1267 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 MTRQ99707 1265 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 BLZF1Q9H2G9 400 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 PCDHA6Q9UN73 950 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 DAGLAQ9Y4D2 1042 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 PCDHA8Q9Y5H6 950 aa9.06□□□□□ -0.96
PDLIM5-204ENST00000380176 KLRF2D3W0D1 207 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 NUBP1P53384 320 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 CERS5Q8N5B7 392 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 TRIML1Q8N9V2 468 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 CCDC150Q8NCX0 1101 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 ENOX1Q8TC92 643 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 CEP95Q96GE4 821 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 FAM163AQ96GL9 167 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 MYH8P13535 1937 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 STXBP3O00186 592 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 CALML3P27482 149 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 TRAPPC10P48553 1259 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 STX17P56962 302 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 PICALMQ13492 652 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 CEP135Q66GS9 1140 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 KLHL10Q6JEL2 608 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 SP8Q8IXZ3 490 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 NEDD1Q8NHV4 660 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 SH3GLB2Q9NR46 395 aa9.05□□□□□ -0.96
PDLIM5-204ENST00000380176 COBLO75128 1261 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 DOK7Q18PE1 504 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 INF2Q27J81 1249 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 PDXDC2PQ6P474 469 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 COL23A1Q86Y22 540 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 HOMER1Q86YM7 354 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 TMEM60Q9H2L4 133 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 BARHL2Q9NY43 387 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 PP2D1A8MPX8 630 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 CBFA2T2O43439 604 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 SLURP2P0DP57 97 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 GNAQP50148 359 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 CUL4BQ13620 913 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 PTPN14Q15678 1187 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 CCDC178Q5BJE1 867 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 CLEC10AQ8IUN9 316 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 TBC1D22AQ8WUA7 517 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 VAT1LQ9HCJ6 419 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 DDX4Q9NQI0 724 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 KCND1Q9NSA2 647 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 ATP6V0A2Q9Y487 856 aa9.04□□□□□ -0.96
PDLIM5-204ENST00000380176 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 SRGNP10124 158 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 TOP1P11387 765 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 PLCG2P16885 1265 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 DACH1Q9UI36 760 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 COL11A2P13942 1736 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 CCDC194A0A1B0GVG4 234 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 CTIFO43310 598 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 SCNN1DP51172 638 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 NAA30Q147X3 362 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 KARSQ15046 597 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 APTXQ7Z2E3 356 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 PPP1R13BQ96KQ4 1090 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 UBA5Q9GZZ9 404 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 PDCL3Q9H2J4 239 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 TMX1Q9H3N1 280 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 ZNF287Q9HBT7 754 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 MYO1BO43795 1136 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 PPP1R37O75864 691 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 PARP1P09874 1014 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 ERCC5P28715 1186 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 NT5C2P49902 561 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 MCM6Q14566 821 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 CERS3Q8IU89 383 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 GPIHBP1Q8IV16 184 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 IQUBQ8NA54 791 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 GSDMAQ96QA5 445 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 KCNQ5Q9NR82 932 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 NRXN2Q9P2S2 1712 aa9.03□□□□□ -0.96
PDLIM5-204ENST00000380176 TEX33O43247 280 aa9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 TBX2Q13207 712 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-204ENST00000380176 ARL6IP4Q66PJ3 421 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms