RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 ZMYND12Q9H0C1 365 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 TDRD3Q9H7E2 651 aaKnown RBP19.19■□□□□ 0.66
HLA-A-202ENST00000376806 PCDHA6Q9UN73 950 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 BCS1LQ9Y276 419 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 ZKSCAN5Q9Y2L8 839 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 PCDHA8Q9Y5H6 950 aa19.19■□□□□ 0.66
HLA-A-202ENST00000376806 FAM196BA6NMK8 535 aa19.18■□□□□ 0.66
HLA-A-202ENST00000376806 POLR2DO15514 142 aaKnown RBP19.18■□□□□ 0.66
HLA-A-202ENST00000376806 USP49Q70CQ1 688 aa19.18■□□□□ 0.66
HLA-A-202ENST00000376806 ZNF277Q9NRM2 450 aaPredicted RBP19.18■□□□□ 0.66
HLA-A-202ENST00000376806 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.18■□□□□ 0.66
HLA-A-202ENST00000376806 BECN2A8MW95 431 aa19.18■□□□□ 0.66
HLA-A-202ENST00000376806 hCG_1984214I3L0E3 225 aa19.18■□□□□ 0.66
HLA-A-202ENST00000376806 ENTPD3O75355 529 aa19.18■□□□□ 0.66
HLA-A-202ENST00000376806 AOPEPQ8N6M6 819 aa19.18■□□□□ 0.66
HLA-A-202ENST00000376806 ZNF713Q8N859 430 aaPredicted RBP19.18■□□□□ 0.66
HLA-A-202ENST00000376806 TRIM34Q9BYJ4 488 aa19.18■□□□□ 0.66
HLA-A-202ENST00000376806 UBA5Q9GZZ9 404 aa19.18■□□□□ 0.66
HLA-A-202ENST00000376806 HOOK1Q9UJC3 728 aaKnown RBP19.18■□□□□ 0.66
HLA-A-202ENST00000376806 PSMD14O00487 310 aa19.17■□□□□ 0.66
HLA-A-202ENST00000376806 MCM7P33993 719 aa19.17■□□□□ 0.66
HLA-A-202ENST00000376806 ZNF543Q08ER8 600 aa19.17■□□□□ 0.66
HLA-A-202ENST00000376806 SOGA3Q5TF21 947 aa19.17■□□□□ 0.66
HLA-A-202ENST00000376806 SARM1Q6SZW1 724 aa19.17■□□□□ 0.66
HLA-A-202ENST00000376806 PLA2G4DQ86XP0 818 aa19.17■□□□□ 0.66
HLA-A-202ENST00000376806 PRMT6Q96LA8 375 aaPredicted RBP19.17■□□□□ 0.66
HLA-A-202ENST00000376806 VAT1LQ9HCJ6 419 aa19.17■□□□□ 0.66
HLA-A-202ENST00000376806 SERTAD1Q9UHV2 236 aa19.17■□□□□ 0.66
HLA-A-202ENST00000376806 ACTN4O43707 911 aaKnown RBP19.16■□□□□ 0.66
HLA-A-202ENST00000376806 RAD17O75943 681 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 ZNF75DP51815 510 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 CERKLQ49MI3 558 aaPredicted RBP19.16■□□□□ 0.66
HLA-A-202ENST00000376806 TATDN1Q6P1N9 297 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 SYMPKQ92797 1274 aaKnown RBP19.16■□□□□ 0.66
HLA-A-202ENST00000376806 VPS33BQ9H267 617 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 ESYT2A0FGR8 921 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 VWA3AA6NCI4 1184 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 FOXN1O15353 648 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 VIL1P09327 827 aaKnown RBP19.16■□□□□ 0.66
HLA-A-202ENST00000376806 MDM2Q00987 491 aaPredicted RBP19.16■□□□□ 0.66
HLA-A-202ENST00000376806 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 POSTNQ15063 836 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 FOXP4Q8IVH2 680 aaPredicted RBP19.16■□□□□ 0.66
HLA-A-202ENST00000376806 PDILTQ8N807 584 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 GMLQ99445 158 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 TRIM5Q9C035 493 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 C6orf50Q9HD87 102 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 GPCPD1Q9NPB8 672 aa19.16■□□□□ 0.66
HLA-A-202ENST00000376806 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.16■□□□□ 0.66
HLA-A-202ENST00000376806 SPDYE2BA6NHP3 402 aa19.15■□□□□ 0.66
HLA-A-202ENST00000376806 SPDYE6P0CI01 402 aa19.15■□□□□ 0.66
HLA-A-202ENST00000376806 GNA11P29992 359 aa19.15■□□□□ 0.66
HLA-A-202ENST00000376806 SHROOM1Q2M3G4 852 aaPredicted RBP19.15■□□□□ 0.66
HLA-A-202ENST00000376806 KRT25Q7Z3Z0 450 aa19.15■□□□□ 0.66
HLA-A-202ENST00000376806 EPSTI1Q96J88 318 aa19.15■□□□□ 0.66
HLA-A-202ENST00000376806 A0A087X0B3 334 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 SMCO2A6NFE2 343 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 INF2Q27J81 1249 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 CCDC96Q2M329 555 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 GPATCH4Q5T3I0 446 aaKnown RBP19.14■□□□□ 0.65
HLA-A-202ENST00000376806 ARL6IP4Q66PJ3 421 aaKnown RBP19.14■□□□□ 0.65
HLA-A-202ENST00000376806 KANK3Q6NY19 840 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.14■□□□□ 0.65
HLA-A-202ENST00000376806 C4orf32Q8N8J7 132 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 TMOD2Q9NZR1 351 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 NYAP2Q9P242 653 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 HDAC9Q9UKV0 1011 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 PCDHA5Q9Y5H7 936 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 PRR29P0C7W0 189 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 NIM1KQ8IY84 436 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 KANSL2Q9H9L4 492 aa19.14■□□□□ 0.65
HLA-A-202ENST00000376806 ISM2Q6H9L7 571 aa19.13■□□□□ 0.65
HLA-A-202ENST00000376806 TMEM179Q6ZVK1 233 aa19.13■□□□□ 0.65
HLA-A-202ENST00000376806 SPC24Q8NBT2 197 aa19.13■□□□□ 0.65
HLA-A-202ENST00000376806 MKL1Q969V6 931 aa19.13■□□□□ 0.65
HLA-A-202ENST00000376806 DHX58Q96C10 678 aa19.13■□□□□ 0.65
HLA-A-202ENST00000376806 JMJD4Q9H9V9 463 aa19.13■□□□□ 0.65
HLA-A-202ENST00000376806 GOLGA6L6A8MZA4 724 aa19.12■□□□□ 0.65
HLA-A-202ENST00000376806 GDF11O95390 407 aa19.12■□□□□ 0.65
HLA-A-202ENST00000376806 EEF2P13639 858 aaKnown RBP19.12■□□□□ 0.65
HLA-A-202ENST00000376806 NONOQ15233 471 aaKnown RBP eCLIP19.12■□□□□ 0.65
HLA-A-202ENST00000376806 IL17AQ16552 155 aa19.12■□□□□ 0.65
HLA-A-202ENST00000376806 NT5DC1Q5TFE4 455 aa19.12■□□□□ 0.65
HLA-A-202ENST00000376806 PPP1R18Q6NYC8 613 aa19.12■□□□□ 0.65
HLA-A-202ENST00000376806 ZNRF3Q9ULT6 936 aa19.12■□□□□ 0.65
HLA-A-202ENST00000376806 CDC25BP30305 580 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 ICA1Q05084 483 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 SEPT2Q15019 361 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 DLGAP5Q15398 846 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 ABCB5Q2M3G0 1257 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 TTBK2Q6IQ55 1244 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 GRAMD1CQ8IYS0 662 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 ADGRF4Q8IZF3 695 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 DCAF4Q8WV16 495 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 CCDC34Q96HJ3 373 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 CSRNP1Q96S65 589 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 PNMA6FA0A0J9YX94 578 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 SLFN14P0C7P3 912 aa19.11■□□□□ 0.65
HLA-A-202ENST00000376806 YBX3P16989 372 aaKnown RBP eCLIP19.11■□□□□ 0.65
HLA-A-202ENST00000376806 KCTD1Q719H9 257 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms