RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 LENG1Q96BZ8 264 aaPredicted RBP17.85■□□□□ 0.45
CLCN6-204ENST00000376491 CEP95Q96GE4 821 aa17.85■□□□□ 0.45
CLCN6-204ENST00000376491 SEC62Q99442 399 aaKnown RBP17.85■□□□□ 0.45
CLCN6-204ENST00000376491 TEX13BQ9BXU2 312 aa17.85■□□□□ 0.45
CLCN6-204ENST00000376491 PRDM5Q9NQX1 630 aaPredicted RBP17.85■□□□□ 0.45
CLCN6-204ENST00000376491 DNAJC25-GNG10A0A024R161 153 aa17.84■□□□□ 0.45
CLCN6-204ENST00000376491 PATL2C9JE40 543 aaKnown RBP17.84■□□□□ 0.45
CLCN6-204ENST00000376491 SNAI1O95863 264 aaPredicted RBP17.84■□□□□ 0.45
CLCN6-204ENST00000376491 GNAT2P19087 354 aa17.84■□□□□ 0.45
CLCN6-204ENST00000376491 TLE2Q04725 743 aa17.84■□□□□ 0.45
CLCN6-204ENST00000376491 FAM109BQ6ICB4 259 aaPredicted RBP17.84■□□□□ 0.45
CLCN6-204ENST00000376491 IFNL3Q8IZI9 196 aa17.84■□□□□ 0.45
CLCN6-204ENST00000376491 ZNF444Q8N0Y2 327 aaPredicted RBP17.84■□□□□ 0.45
CLCN6-204ENST00000376491 CPXCR1Q8N123 301 aa17.84■□□□□ 0.45
CLCN6-204ENST00000376491 PRPF38AQ8NAV1 312 aaKnown RBP17.84■□□□□ 0.45
CLCN6-204ENST00000376491 PI4K2BQ8TCG2 481 aa17.84■□□□□ 0.45
CLCN6-204ENST00000376491 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
CLCN6-204ENST00000376491 MTMR4Q9NYA4 1195 aa17.84■□□□□ 0.45
CLCN6-204ENST00000376491 PCDHB15Q9Y5E8 787 aa17.84■□□□□ 0.45
CLCN6-204ENST00000376491 LAMA2P24043 3122 aaKnown RBP17.83■□□□□ 0.45
CLCN6-204ENST00000376491 ATP2A1O14983 1001 aa17.83■□□□□ 0.44
CLCN6-204ENST00000376491 ADAMTS4O75173 837 aa17.83■□□□□ 0.44
CLCN6-204ENST00000376491 APPP05067 770 aa17.83■□□□□ 0.44
CLCN6-204ENST00000376491 AKR1A1P14550 325 aa17.83■□□□□ 0.44
CLCN6-204ENST00000376491 ITGB8P26012 769 aa17.83■□□□□ 0.44
CLCN6-204ENST00000376491 LRRC47Q8N1G4 583 aaKnown RBP17.83■□□□□ 0.44
CLCN6-204ENST00000376491 GUCD1Q96NT3 240 aa17.83■□□□□ 0.44
CLCN6-204ENST00000376491 RAVER2Q9HCJ3 691 aaKnown RBP17.83■□□□□ 0.44
CLCN6-204ENST00000376491 TTC41PQ6P2S7 1318 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 MAMDC4Q6UXC1 1216 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 RNF180Q86T96 592 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 MSL3Q8N5Y2 521 aaKnown RBP17.82■□□□□ 0.44
CLCN6-204ENST00000376491 KIFC2Q96AC6 838 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 DDX11Q96FC9 970 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 FGD4Q96M96 766 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 SLC38A10Q9HBR0 1119 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 CNPY2Q9Y2B0 182 aa17.82■□□□□ 0.44
CLCN6-204ENST00000376491 PLIN4Q96Q06 1357 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 A0A1W2PQ45 241 aaPredicted RBP17.81■□□□□ 0.44
CLCN6-204ENST00000376491 A0A1W2PQY0 241 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 ZBED4O75132 1171 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 TTLL1O95922 423 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLCN6-204ENST00000376491 GMCL1P1Q8NEA9 526 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 NEDD1Q8NHV4 660 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 FAM161BQ96MY7 647 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 ZNF287Q9HBT7 754 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 FEM1BQ9UK73 627 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 SYNPO2Q9UMS6 1093 aa17.81■□□□□ 0.44
CLCN6-204ENST00000376491 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
CLCN6-204ENST00000376491 SYNRGQ9UMZ2 1314 aa17.8■□□□□ 0.44
CLCN6-204ENST00000376491 IRX5P78411 483 aaPredicted RBP17.8■□□□□ 0.44
CLCN6-204ENST00000376491 ZMYM1Q5SVZ6 1142 aa17.8■□□□□ 0.44
CLCN6-204ENST00000376491 SLFN13Q68D06 897 aa17.8■□□□□ 0.44
CLCN6-204ENST00000376491 KLHDC9Q8NEP7 349 aa17.8■□□□□ 0.44
CLCN6-204ENST00000376491 TACC3Q9Y6A5 838 aa17.8■□□□□ 0.44
CLCN6-204ENST00000376491 MYADML2A6NDP7 307 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 ERC2O15083 957 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 FOXP2O15409 715 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 ADCY6O43306 1168 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 CLTBP09497 229 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 TSPY3P0CV98 308 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 TSPY8P0CW00 308 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 TFAP4Q01664 338 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 PPARAQ07869 468 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 LRRFIP1Q32MZ4 808 aaKnown RBP17.79■□□□□ 0.44
CLCN6-204ENST00000376491 CCSAPQ6IQ19 270 aaPredicted RBP17.79■□□□□ 0.44
CLCN6-204ENST00000376491 ZNF467Q7Z7K2 595 aaPredicted RBP17.79■□□□□ 0.44
CLCN6-204ENST00000376491 TSEN34Q9BSV6 310 aaKnown RBP17.79■□□□□ 0.44
CLCN6-204ENST00000376491 FSD1Q9BTV5 496 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
CLCN6-204ENST00000376491 FAM184BQ9ULE4 1060 aa17.79■□□□□ 0.44
CLCN6-204ENST00000376491 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 PQBP1O60828 265 aaKnown RBP17.78■□□□□ 0.44
CLCN6-204ENST00000376491 BMP3P12645 472 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 ACLYP53396 1101 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 EPHB4P54760 987 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 PDE4BQ07343 736 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 ZNF697Q5TEC3 545 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 CCDC129Q6ZRS4 1044 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 CHST13Q8NET6 341 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 NACAP1Q9BZK3 213 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 NAPBQ9H115 298 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 INCENPQ9NQS7 918 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.78■□□□□ 0.44
CLCN6-204ENST00000376491 CTDP1Q9Y5B0 961 aaPredicted RBP17.78■□□□□ 0.44
CLCN6-204ENST00000376491 A0A0C4DFX4 3053 aa17.78■□□□□ 0.44
CLCN6-204ENST00000376491 SALL3Q9BXA9 1300 aa17.77■□□□□ 0.44
CLCN6-204ENST00000376491 DUSP11O75319 330 aaKnown RBP17.77■□□□□ 0.44
CLCN6-204ENST00000376491 OAZ1P54368 228 aa17.77■□□□□ 0.44
CLCN6-204ENST00000376491 FAAP100Q0VG06 881 aa17.77■□□□□ 0.44
CLCN6-204ENST00000376491 ACVR2BQ13705 512 aa17.77■□□□□ 0.44
CLCN6-204ENST00000376491 KCNA10Q16322 511 aa17.77■□□□□ 0.44
CLCN6-204ENST00000376491 ANKRD35Q8N283 1001 aa17.77■□□□□ 0.44
CLCN6-204ENST00000376491 STARD7Q9NQZ5 370 aa17.77■□□□□ 0.44
CLCN6-204ENST00000376491 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.77■□□□□ 0.44
CLCN6-204ENST00000376491 ZNF536O15090 1300 aa17.76■□□□□ 0.43
CLCN6-204ENST00000376491 MOXD2PA6NHM9 499 aa17.76■□□□□ 0.43
CLCN6-204ENST00000376491 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms