RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 LTBP1Q14766 1721 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 DDX60LQ5H9U9 1706 aaKnown RBP15.85■□□□□ 0.13
MSH5-202ENST00000375740 POLR3GO15318 223 aaPredicted RBP15.85■□□□□ 0.13
MSH5-202ENST00000375740 CASP1P29466 404 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 RASGRP2Q7LDG7 609 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 COL23A1Q86Y22 540 aaPredicted RBP15.85■□□□□ 0.13
MSH5-202ENST00000375740 CCDC34Q96HJ3 373 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 ZFP91Q96JP5 570 aaPredicted RBP15.85■□□□□ 0.13
MSH5-202ENST00000375740 COA1Q9GZY4 146 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 DACH1Q9UI36 760 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 SNED1Q8TER0 1413 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 KLRF2D3W0D1 207 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 F8W031 263 aaPredicted RBP15.84■□□□□ 0.13
MSH5-202ENST00000375740 CBFA2T2O43439 604 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 MYO1BO43795 1136 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 PNMA6AP0CW24 399 aaPredicted RBP15.84■□□□□ 0.13
MSH5-202ENST00000375740 SRGNP10124 158 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 BMS1Q14692 1282 aaKnown RBP15.84■□□□□ 0.13
MSH5-202ENST00000375740 CFAP100Q494V2 611 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 HSP90AA4PQ58FG1 418 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 HEATR3Q7Z4Q2 680 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 NLGN1Q8N2Q7 840 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 CPVLQ9H3G5 476 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 LRRC37AA6NMS7 1700 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 M0R2N6 131 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 TRMT44Q8IYL2 757 aaKnown RBP15.84■□□□□ 0.13
MSH5-202ENST00000375740 C4orf32Q8N8J7 132 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 CCDC150Q8NCX0 1101 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 ENOX1Q8TC92 643 aaKnown RBP15.84■□□□□ 0.13
MSH5-202ENST00000375740 MED15Q96RN5 788 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 ZC3H12CQ9C0D7 883 aaKnown RBP15.84■□□□□ 0.13
MSH5-202ENST00000375740 PCDHA6Q9UN73 950 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 PCDHA8Q9Y5H6 950 aa15.84■□□□□ 0.13
MSH5-202ENST00000375740 LZTS2Q9BRK4 669 aa15.83■□□□□ 0.13
MSH5-202ENST00000375740 ZCCHC17Q9NP64 241 aaKnown RBP15.83■□□□□ 0.13
MSH5-202ENST00000375740 BARHL2Q9NY43 387 aa15.83■□□□□ 0.13
MSH5-202ENST00000375740 NFE2L3Q9Y4A8 694 aa15.83■□□□□ 0.13
MSH5-202ENST00000375740 STXBP3O00186 592 aa15.83■□□□□ 0.12
MSH5-202ENST00000375740 PICALMQ13492 652 aa15.83■□□□□ 0.12
MSH5-202ENST00000375740 USP17L2Q6R6M4 530 aa15.83■□□□□ 0.12
MSH5-202ENST00000375740 SYT10Q6XYQ8 523 aa15.83■□□□□ 0.12
MSH5-202ENST00000375740 CEP95Q96GE4 821 aa15.83■□□□□ 0.12
MSH5-202ENST00000375740 CCDC194A0A1B0GVG4 234 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 TMEM232C9JQI7 657 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 NPR1P16066 1061 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 SFPQP23246 707 aaKnown RBP eCLIP15.82■□□□□ 0.12
MSH5-202ENST00000375740 DPYDQ12882 1025 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 DOK7Q18PE1 504 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 CERS5Q8N5B7 392 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 STAMQ92783 540 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 MXD3Q9BW11 206 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 PARP1P09874 1014 aaKnown RBP15.82■□□□□ 0.12
MSH5-202ENST00000375740 PTPN21Q16825 1174 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 E4F1Q66K89 784 aaPredicted RBP15.82■□□□□ 0.12
MSH5-202ENST00000375740 CCDC148Q8NFR7 591 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
MSH5-202ENST00000375740 TOP1P11387 765 aaKnown RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 E2F4Q16254 413 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 ARHGAP29Q52LW3 1261 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 ARL6IP4Q66PJ3 421 aaKnown RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 VSTM4Q8IW00 320 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 IQUBQ8NA54 791 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 DAGLBQ8NCG7 672 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 SEC31AO94979 1220 aaKnown RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 ZNF18P17022 549 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 HMGB2P26583 209 aaKnown RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 ERCC5P28715 1186 aaPredicted RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 GALNT17Q6IS24 598 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 DPP8Q6V1X1 898 aaPredicted RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 SPZ1Q9BXG8 430 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 VAT1LQ9HCJ6 419 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 SAMSN1Q9NSI8 373 aaKnown RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 INTS13Q9NVM9 706 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 TTF2Q9UNY4 1162 aaKnown RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 CD44P16070 742 aaKnown RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 DHX8Q14562 1220 aaKnown RBP15.81■□□□□ 0.12
MSH5-202ENST00000375740 INF2Q27J81 1249 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 GSDMAQ96QA5 445 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 EPC1Q9H2F5 836 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 L2HGDHQ9H9P8 463 aa15.81■□□□□ 0.12
MSH5-202ENST00000375740 APBA3O96018 575 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 CDC25AP30304 524 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 ALDH1B1P30837 517 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 NOVP48745 357 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 CCDC93Q567U6 631 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 FOCADQ5VW36 1801 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 PDXDC2PQ6P474 469 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 DDX4Q9NQI0 724 aaKnown RBP15.8■□□□□ 0.12
MSH5-202ENST00000375740 KCND1Q9NSA2 647 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 SUGT1Q9Y2Z0 365 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 USP17L5A8MUK1 530 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 LONP1P36776 959 aaKnown RBP15.8■□□□□ 0.12
MSH5-202ENST00000375740 SCNN1DP51172 638 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 HOMER1Q86YM7 354 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 BLZF1Q9H2G9 400 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 USP40Q9NVE5 1235 aa15.8■□□□□ 0.12
MSH5-202ENST00000375740 PLSCR1O15162 318 aa15.79■□□□□ 0.12
MSH5-202ENST00000375740 MMP10P09238 476 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms