RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MMP1P03956 469 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 ADD2P35612 726 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 MYCT1Q8N699 235 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTCH1-203ENST00000375274 EEF1GP26641 437 aaKnown RBP12.75□□□□□ -0.37
PTCH1-203ENST00000375274 WDR44Q5JSH3 913 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 GGA1Q9UJY5 639 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 PCDHA12Q9UN75 941 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 FAN1Q9Y2M0 1017 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 ROBO2Q9HCK4 1378 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 SOWAHDA6NJG2 315 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 BACH1O14867 736 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 BCRP11274 1271 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 DENND2CQ68D51 928 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 GALNT17Q6IS24 598 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 BAIAP2L1Q9UHR4 511 aa12.75□□□□□ -0.37
PTCH1-203ENST00000375274 CCDC169A6NNP5 214 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 KRIT1O00522 736 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 PCP11498 1178 aaKnown RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 SMTNP53814 917 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 SP4Q02446 784 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 TERF2Q15554 542 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 CLUL1Q15846 466 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 CEP128Q6ZU80 1094 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 EXOC4Q96A65 974 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 STK24Q9Y6E0 443 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 KIF1BO60333 1816 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 B4DLN1 442 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 SH2B2O14492 632 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 CCT5P48643 541 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 MSANTD4Q8NCY6 345 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 ACRBPQ8NEB7 543 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 U2AF1L4Q8WU68 220 aaKnown RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 POLR2FP61218 127 aaKnown RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 ARHGAP44Q17R89 818 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 FAM26FQ5R3K3 315 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 ZSWIM5Q9P217 1185 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 RGS16O15492 202 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 BUB1BO60566 1050 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 FERP16591 822 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 ABCB4P21439 1286 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 LIFRP42702 1097 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 GUCY2DQ02846 1103 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 PLA2G4DQ86XP0 818 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 CACNA2D3Q8IZS8 1091 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-203ENST00000375274 PLCB1Q9NQ66 1216 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 GJB4Q9NTQ9 266 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 KDM3AQ9Y4C1 1321 aa12.74□□□□□ -0.37
PTCH1-203ENST00000375274 ZMYND10O75800 440 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 NAA30Q147X3 362 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-203ENST00000375274 UAP1Q16222 522 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-203ENST00000375274 CCDC144BQ3MJ40 725 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 MRRFQ96E11 262 aaKnown RBP12.73□□□□□ -0.37
PTCH1-203ENST00000375274 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 PREX2Q70Z35 1606 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 H2AFZP0C0S5 128 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 CLNS1AP54105 237 aaKnown RBP12.73□□□□□ -0.37
PTCH1-203ENST00000375274 PPP2R5EQ16537 467 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 H2AFVQ71UI9 128 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 RETREG2Q8NC44 543 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
PTCH1-203ENST00000375274 SRPRBQ9Y5M8 271 aaKnown RBP12.73□□□□□ -0.37
PTCH1-203ENST00000375274 RNF40O75150 1001 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 GOLGA8HP0CJ92 632 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 PTPROQ16827 1216 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 SPATS2Q86XZ4 545 aaKnown RBP12.73□□□□□ -0.37
PTCH1-203ENST00000375274 STMN2Q93045 179 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 PCK1P35558 622 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 APBA1Q02410 837 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 CHRNDQ07001 517 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 EHHADHQ08426 723 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 KCTD16Q68DU8 428 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
PTCH1-203ENST00000375274 GAS8O95995 478 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 HSPA2P54652 639 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 PANX2Q96RD6 677 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 MAGEF1Q9HAY2 307 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 DHTKD1Q96HY7 919 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-203ENST00000375274 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
PTCH1-203ENST00000375274 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
PTCH1-203ENST00000375274 CUEDC2Q9H467 287 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 FEZ2Q9UHY8 353 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-203ENST00000375274 CCDC160A6NGH7 325 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 CDC25AP30304 524 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 MAP2K2P36507 400 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 LIN9Q5TKA1 542 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 GKAP1Q5VSY0 366 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-203ENST00000375274 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms