RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 MMP10P09238 476 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 UBXN2AP68543 259 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 SP4Q02446 784 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 PTPROQ16827 1216 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 SPATA1Q5VX52 437 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.295e-13■■■■■ 221.1
PACSIN1-202ENST00000374043 TCP10L2B9ZVM9 353 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 MTF1Q14872 753 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 PRR5LQ6MZQ0 368 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 GJA10Q969M2 543 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 TEKT1Q969V4 418 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 IL17RAQ96F46 866 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 TOPAZ1Q8N9V7 1692 aa13.25□□□□□ -0.29
PACSIN1-202ENST00000374043 IKBKBO14920 756 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 SLURP2P0DP57 97 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 PTPAQ15257 358 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 GRIK5Q16478 980 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CCDC122Q5T0U0 273 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CCDC42Q96M95 316 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 NLRC4Q9NPP4 1024 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 RIC1Q4ADV7 1423 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 DDX39AO00148 427 aaKnown RBP13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 MRPL12P52815 198 aaKnown RBP13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 NCAPH2Q6IBW4 605 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 SARM1Q6SZW1 724 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 FBXO33Q7Z6M2 555 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 NEK8Q86SG6 692 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CFBP00751 764 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 OR52Z1P0C646 297 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 USP8P40818 1118 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CYP4A11Q02928 519 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 PPP2R3AQ06190 1150 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 HERC4Q5GLZ8 1057 aaPredicted RBP13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CCDC174Q6PII3 467 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CNGA4Q8IV77 575 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 FOXP4Q8IVH2 680 aaPredicted RBP13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 ACRBPQ8NEB7 543 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CEP89Q96ST8 783 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 WDR19Q8NEZ3 1342 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 SLIT3O75094 1523 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CTAGE9A4FU28 777 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 TERF1P54274 439 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 TROAPQ12815 778 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
PACSIN1-202ENST00000374043 VSTM4Q8IW00 320 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 TBC1D22AQ8WUA7 517 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 GJD4Q96KN9 370 aaPredicted RBP13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 TRPC5Q9UL62 973 aaPredicted RBP13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 SALL1Q9NSC2 1324 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 GOLGA6L9A6NEM1 432 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 CDC25BP30305 580 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 NOP2P46087 812 aaKnown RBP13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 TOGARAM2Q6ZUX3 1019 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 C2CD5Q86YS7 1000 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 RUFY1Q96T51 708 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 B4DLN1 442 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 H0YIN7 160 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 PLCG1P19174 1290 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 PFKFB3Q16875 520 aaPredicted RBP13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 KRT27Q7Z3Y8 459 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 SERPINB13Q9UIV8 391 aa13.23□□□□□ -0.29
PACSIN1-202ENST00000374043 ENC1O14682 589 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 GTPBP6O43824 516 aaPredicted RBP13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 DCAF17Q5H9S7 520 aaPredicted RBP13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 ZFYVE27Q5T4F4 411 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 PSTPIP2Q9H939 334 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 PRR16Q569H4 304 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 SPTLC3Q9NUV7 552 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 STK36Q9NRP7 1315 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 POTEMA6NI47 508 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
PACSIN1-202ENST00000374043 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 CCZ1BP86790 482 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 CCZ1P86791 482 aaPredicted RBP13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 TAF3Q5VWG9 929 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 TTBK2Q6IQ55 1244 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 ENOX1Q8TC92 643 aaKnown RBP13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 GSDMAQ96QA5 445 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 SPAG5Q96R06 1193 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 MEIS1O00470 390 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 ERLIN1O75477 346 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 BBOX1O75936 387 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 RAD17O75943 681 aa13.21□□□□□ -0.29
PACSIN1-202ENST00000374043 COPB1P53618 953 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms