RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CABS1Q96KC9 395 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 USP44Q9H0E7 712 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 EXOC7Q9UPT5 735 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 ZBTB7AO95365 584 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 CABP7Q86V35 215 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 REXO1Q8N1G1 1221 aaKnown RBP15.79■□□□□ 0.12
TRAF1-201ENST00000373887 SNX21Q969T3 373 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 ABL1P00519 1130 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 PDE6AP16499 860 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 ARHGAP24Q8N264 748 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 SUGCTQ9HAC7 445 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 BAIAP2L1Q9UHR4 511 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 CDAN1Q8IWY9 1227 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 ABCB5Q2M3G0 1257 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 SRGAP1Q7Z6B7 1085 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 SLC5A4Q9NY91 659 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 TAB2Q9NYJ8 693 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 DYNLL1P63167 89 aaKnown RBP15.79■□□□□ 0.12
TRAF1-201ENST00000373887 ARHGEF25Q86VW2 580 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 EAF2Q96CJ1 260 aaPredicted RBP15.79■□□□□ 0.12
TRAF1-201ENST00000373887 XDHP47989 1333 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 ARAP3Q8WWN8 1544 aa15.79■□□□□ 0.12
TRAF1-201ENST00000373887 TUBBP07437 444 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 POLA2Q14181 598 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 ZNF654Q8IZM8 581 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 CCDC89Q8N998 374 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 RBSNQ9H1K0 784 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 INSRP06213 1382 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 PRPF6O94906 941 aaKnown RBP15.78■□□□□ 0.12
TRAF1-201ENST00000373887 CCDC125Q86Z20 511 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 PSTPIP2Q9H939 334 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 ARHGAP42A6NI28 874 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 EXOC3O60645 756 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 ATP5JP18859 108 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 TBC1D10BQ4KMP7 808 aaPredicted RBP15.78■□□□□ 0.12
TRAF1-201ENST00000373887 DPP9Q86TI2 863 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 GABPB2Q8TAK5 448 aaPredicted RBP15.78■□□□□ 0.12
TRAF1-201ENST00000373887 NSMCE1Q8WV22 266 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 AFF2P51816 1311 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 TRIM14Q14142 442 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 ADGRL2O95490 1459 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 TECP42680 631 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 FANCCQ00597 558 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 MUM1Q2TAK8 710 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 DALRD3Q5D0E6 543 aaKnown RBP15.78■□□□□ 0.12
TRAF1-201ENST00000373887 CDC37L1Q7L3B6 337 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 CCPG1Q9ULG6 757 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 ADGBQ8N7X0 1667 aa15.78■□□□□ 0.12
TRAF1-201ENST00000373887 WDR17Q8IZU2 1322 aa15.77■□□□□ 0.12
TRAF1-201ENST00000373887 C21orf2O43822 256 aa15.77■□□□□ 0.12
TRAF1-201ENST00000373887 CD19P15391 556 aa15.77■□□□□ 0.12
TRAF1-201ENST00000373887 OAS2P29728 719 aaKnown RBP15.77■□□□□ 0.12
TRAF1-201ENST00000373887 SLC12A2P55011 1212 aa15.77■□□□□ 0.12
TRAF1-201ENST00000373887 PAK1Q13153 545 aa15.77■□□□□ 0.12
TRAF1-201ENST00000373887 KCTD1Q719H9 257 aa15.77■□□□□ 0.12
TRAF1-201ENST00000373887 DKC1O60832 514 aaKnown RBP eCLIP15.77■□□□□ 0.12
TRAF1-201ENST00000373887 PTH1RQ03431 593 aa15.77■□□□□ 0.12
TRAF1-201ENST00000373887 TLR7Q9NYK1 1049 aaKnown RBP15.77■□□□□ 0.12
TRAF1-201ENST00000373887 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 MGEA5O60502 916 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 BAG2O95816 211 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 RPS6KA2Q15349 733 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 KMT5BQ4FZB7 885 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 SLC9C1Q4G0N8 1177 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 SND1Q7KZF4 910 aaKnown RBP eCLIP15.77■□□□□ 0.11
TRAF1-201ENST00000373887 PIGBQ92521 554 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 GBP5Q96PP8 586 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 RTEL1Q9NZ71 1219 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 PALD1Q9ULE6 856 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 VGLL3A8MV65 326 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 OPHN1O60890 802 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 POLR2MP0CAP2 368 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 TNNI1P19237 187 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 APOL6Q9BWW8 343 aa15.77■□□□□ 0.11
TRAF1-201ENST00000373887 GUCY2FP51841 1108 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 ANKRD20A3Q5VUR7 823 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 MAGI3Q5TCQ9 1506 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 ARHGAP44Q17R89 818 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 DENND2CQ68D51 928 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 DEPTORQ8TB45 409 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 TSPYL2Q9H2G4 693 aaPredicted RBP15.76■□□□□ 0.11
TRAF1-201ENST00000373887 SESN3P58005 492 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 RBBP5Q15291 538 aaKnown RBP15.76■□□□□ 0.11
TRAF1-201ENST00000373887 PTPROQ16827 1216 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 RUFY4Q6ZNE9 571 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 CAPN12Q6ZSI9 719 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 BRINP3Q76B58 766 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 CTAGE3PQ8IX95 158 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 PNMA1Q8ND90 353 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 MMP10P09238 476 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 GNPTABQ3T906 1256 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 SLFN13Q68D06 897 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 GLT8D2Q9H1C3 349 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRAF1-201ENST00000373887 SPDYE16A6NNV3 312 aaPredicted RBP15.76■□□□□ 0.11
TRAF1-201ENST00000373887 STMN1P16949 149 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 CXorf38Q8TB03 319 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 LZTS2Q9BRK4 669 aa15.76■□□□□ 0.11
TRAF1-201ENST00000373887 LGSNQ5TDP6 509 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms