RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 GREB1LQ9C091 1923 aaPredicted RBP11.16□□□□□ -0.62
TMEM254-201ENST00000372273 VWA5AO00534 786 aa11.16□□□□□ -0.62
TMEM254-201ENST00000372273 DTNBO60941 627 aa11.16□□□□□ -0.62
TMEM254-201ENST00000372273 FMNL1O95466 1100 aaPredicted RBP11.16□□□□□ -0.62
TMEM254-201ENST00000372273 MYCP01106 439 aaPredicted RBP11.16□□□□□ -0.62
TMEM254-201ENST00000372273 DSG3P32926 999 aa11.16□□□□□ -0.62
TMEM254-201ENST00000372273 WDR78Q5VTH9 848 aa11.16□□□□□ -0.62
TMEM254-201ENST00000372273 RNF20Q5VTR2 975 aa11.16□□□□□ -0.62
TMEM254-201ENST00000372273 CLEC17AQ6ZS10 378 aa11.16□□□□□ -0.62
TMEM254-201ENST00000372273 TTC14Q96N46 770 aa11.16□□□□□ -0.62
TMEM254-201ENST00000372273 KAT14Q9H8E8 782 aa11.16□□□□□ -0.62
TMEM254-201ENST00000372273 CASTP20810 708 aaKnown RBP11.15□□□□□ -0.62
TMEM254-201ENST00000372273 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 ERVK-24P63145 666 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 CMTR1Q8N1G2 835 aaKnown RBP11.15□□□□□ -0.62
TMEM254-201ENST00000372273 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 LY9Q9HBG7 655 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 HOXC10Q9NYD6 342 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 PPP1R9AQ9ULJ8 1098 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 GABRQQ9UN88 632 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 RIPK3Q9Y572 518 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 ZSWIM8A7E2V4 1837 aa11.15□□□□□ -0.62
TMEM254-201ENST00000372273 MCM5P33992 734 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 STAT2P52630 851 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 WTAPQ15007 396 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 FAM110CQ1W6H9 321 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 LBX2Q6XYB7 198 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 NBPF11Q86T75 865 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 NUP133Q8WUM0 1156 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 GMCL1Q96IK5 515 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 SLF1Q9BQI6 1058 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 BRPF3Q9ULD4 1205 aa11.15□□□□□ -0.63
TMEM254-201ENST00000372273 LOC285556D6RIA3 1793 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 BAG4O95429 457 aaKnown RBP11.14□□□□□ -0.63
TMEM254-201ENST00000372273 EXOSC10Q01780 885 aaKnown RBP11.14□□□□□ -0.63
TMEM254-201ENST00000372273 PRKCZQ05513 592 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 CCDC174Q6PII3 467 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 KCNB2Q92953 911 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 TMX3Q96JJ7 454 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 RAVER2Q9HCJ3 691 aaKnown RBP11.14□□□□□ -0.63
TMEM254-201ENST00000372273 VAT1LQ9HCJ6 419 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 HOMER2Q9NSB8 354 aa11.14□□□□□ -0.63
TMEM254-201ENST00000372273 ERICH2A1L162 156 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
TMEM254-201ENST00000372273 SLC35G1Q2M3R5 365 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 NFXL1Q6ZNB6 911 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 DHX32Q7L7V1 743 aaKnown RBP11.13□□□□□ -0.63
TMEM254-201ENST00000372273 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
TMEM254-201ENST00000372273 AGBL1Q96MI9 1066 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 MOV10L1Q9BXT6 1211 aaKnown RBP11.13□□□□□ -0.63
TMEM254-201ENST00000372273 ZNF214Q9UL59 606 aaPredicted RBP11.13□□□□□ -0.63
TMEM254-201ENST00000372273 PRR12Q9ULL5 1215 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 LAMA2P24043 3122 aaKnown RBP11.13□□□□□ -0.63
TMEM254-201ENST00000372273 TNPO2O14787 897 aaKnown RBP11.13□□□□□ -0.63
TMEM254-201ENST00000372273 SNHG28P0DPA3 235 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 ERCC3P19447 782 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 GCLCP48506 637 aaPredicted RBP11.13□□□□□ -0.63
TMEM254-201ENST00000372273 ZNF543Q08ER8 600 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 TROAPQ12815 778 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 ANKS1AQ92625 1134 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 MCOLN1Q9GZU1 580 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 SPATC1LQ9H0A9 340 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 ADAMTS5Q9UNA0 930 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 LAMA4Q16363 1823 aa11.13□□□□□ -0.63
TMEM254-201ENST00000372273 FLT3LGP49771 235 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 SART3Q15020 963 aaKnown RBP11.12□□□□□ -0.63
TMEM254-201ENST00000372273 NOM1Q5C9Z4 860 aaKnown RBP11.12□□□□□ -0.63
TMEM254-201ENST00000372273 Q6ZUG5 572 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 NCAPG2Q86XI2 1143 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 REPS2Q8NFH8 660 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 INTS4Q96HW7 963 aaKnown RBP11.12□□□□□ -0.63
TMEM254-201ENST00000372273 MORF4L1Q9UBU8 362 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 MAD2L2Q9UI95 211 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 FEM1BQ9UK73 627 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 NAP1L2Q9ULW6 460 aaPredicted RBP11.12□□□□□ -0.63
TMEM254-201ENST00000372273 ZNF536O15090 1300 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 FSD2A1L4K1 749 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 STAT3P40763 770 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 MRE11P49959 708 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 APOBRQ0VD83 1088 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 MCTP1Q6DN14 999 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 SNRNP48Q6IEG0 339 aaKnown RBP11.12□□□□□ -0.63
TMEM254-201ENST00000372273 BLOC1S2Q6QNY1 142 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 GPR142Q7Z601 462 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
TMEM254-201ENST00000372273 SH3TC2Q8TF17 1288 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 BRF1Q92994 677 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 SLC38A10Q9HBR0 1119 aa11.12□□□□□ -0.63
TMEM254-201ENST00000372273 PTCH2Q9Y6C5 1203 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms