RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
TWNK-202ENST00000370228 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
TWNK-202ENST00000370228 PHACTR2O75167 634 aa12.18□□□□□ -0.46
TWNK-202ENST00000370228 IL15P40933 162 aaPredicted RBP12.18□□□□□ -0.46
TWNK-202ENST00000370228 GCLCP48506 637 aaPredicted RBP12.18□□□□□ -0.46
TWNK-202ENST00000370228 ROR2Q01974 943 aaKnown RBP12.18□□□□□ -0.46
TWNK-202ENST00000370228 TMEM62Q0P6H9 643 aa12.18□□□□□ -0.46
TWNK-202ENST00000370228 IFT88Q13099 833 aa12.18□□□□□ -0.46
TWNK-202ENST00000370228 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
TWNK-202ENST00000370228 TSNAXIP1Q2TAA8 658 aa12.18□□□□□ -0.46
TWNK-202ENST00000370228 OGFOD1Q8N543 542 aa12.18□□□□□ -0.46
TWNK-202ENST00000370228 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
TWNK-202ENST00000370228 UNC45AQ9H3U1 944 aa12.18□□□□□ -0.46
TWNK-202ENST00000370228 SH2B1Q9NRF2 756 aaPredicted RBP12.18□□□□□ -0.46
TWNK-202ENST00000370228 RNF8O76064 485 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 RPSAP08865 295 aaKnown RBP12.17□□□□□ -0.46
TWNK-202ENST00000370228 EIF4BP23588 611 aaKnown RBP12.17□□□□□ -0.46
TWNK-202ENST00000370228 AFAP1L1Q8TED9 768 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 ALS2CR12Q96Q35 445 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 TRIM4Q9C037 500 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 DNAAF2Q9NVR5 837 aaKnown RBP12.17□□□□□ -0.46
TWNK-202ENST00000370228 UTP6Q9NYH9 597 aaKnown RBP12.17□□□□□ -0.46
TWNK-202ENST00000370228 SPATA7Q9P0W8 599 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 CACNA1SQ13698 1873 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 PPP1R12BO60237 982 aaPredicted RBP12.17□□□□□ -0.46
TWNK-202ENST00000370228 URI1O94763 535 aaPredicted RBP12.17□□□□□ -0.46
TWNK-202ENST00000370228 CYP11B2P19099 503 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 C16orf87Q6PH81 154 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 ARMC9Q7Z3E5 817 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 CKAP2LQ8IYA6 745 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 MTA3Q9BTC8 594 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 ABCF2Q9UG63 623 aa12.17□□□□□ -0.46
TWNK-202ENST00000370228 SYNRGQ9UMZ2 1314 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 GLRX3O76003 335 aaKnown RBP12.16□□□□□ -0.46
TWNK-202ENST00000370228 PDCP20941 246 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 ANO6Q4KMQ2 910 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 LRRC23Q53EV4 343 aaPredicted RBP12.16□□□□□ -0.46
TWNK-202ENST00000370228 NECAB1Q8N987 351 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 MTRQ99707 1265 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 YIPF3Q9GZM5 350 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 TMEM98Q9Y2Y6 226 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 SLX4Q8IY92 1834 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 ERICH2A1L162 156 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 SMNDC1O75940 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
TWNK-202ENST00000370228 RAD17O75943 681 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 SNCBQ16143 134 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 SMCR8Q8TEV9 937 aaPredicted RBP12.16□□□□□ -0.46
TWNK-202ENST00000370228 CCDC102AQ96A19 550 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 LSG1Q9H089 658 aaKnown RBP12.16□□□□□ -0.46
TWNK-202ENST00000370228 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 DDX60Q8IY21 1712 aaKnown RBP12.16□□□□□ -0.46
TWNK-202ENST00000370228 MICALCLQ6ZW33 695 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 KCNN1Q92952 543 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 TTC14Q96N46 770 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 MTMR6Q9Y217 621 aa12.16□□□□□ -0.46
TWNK-202ENST00000370228 ANKRD31Q8N7Z5 1873 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 SPEF2Q9C093 1822 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 FANCGO15287 622 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 PPIP5K2O43314 1243 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 BBOX1O75936 387 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 LARGE1O95461 756 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
TWNK-202ENST00000370228 TXLNAP40222 546 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 SLC7A5Q01650 507 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 PRPF4BQ13523 1007 aaKnown RBP12.15□□□□□ -0.46
TWNK-202ENST00000370228 MTHFD1LQ6UB35 978 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 FAM228AQ86W67 206 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 HOOK2Q96ED9 719 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 PAPOLBQ9NRJ5 636 aaKnown RBP12.15□□□□□ -0.46
TWNK-202ENST00000370228 SHTN1A0MZ66 631 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 PDHBP11177 359 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 SARM1Q6SZW1 724 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 ZC3H12CQ9C0D7 883 aaKnown RBP12.15□□□□□ -0.46
TWNK-202ENST00000370228 L1RE1Q9UN81 338 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 CD2APQ9Y5K6 639 aa12.15□□□□□ -0.46
TWNK-202ENST00000370228 KLRG2A4D1S0 409 aaPredicted RBP12.14□□□□□ -0.47
TWNK-202ENST00000370228 M0R2C6 588 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 ZNF189O75820 626 aaPredicted RBP12.14□□□□□ -0.47
TWNK-202ENST00000370228 USP5P45974 858 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 PUM3Q15397 648 aaKnown RBP12.14□□□□□ -0.47
TWNK-202ENST00000370228 SLC4A8Q2Y0W8 1093 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 BZW1Q7L1Q6 419 aaKnown RBP12.14□□□□□ -0.47
TWNK-202ENST00000370228 LARGE2Q8N3Y3 721 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 VGLL2Q8N8G2 317 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 SPATA32Q96LK8 384 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 CRAMP1Q96RY5 1269 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 GORASP1Q9BQQ3 440 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 TPCN1Q9ULQ1 816 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 CORO1CQ9ULV4 474 aaPredicted RBP12.14□□□□□ -0.47
TWNK-202ENST00000370228 RIC1Q4ADV7 1423 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 F8VZ95 297 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 GOLGA6L19H0YKK7 550 aa12.14□□□□□ -0.47
TWNK-202ENST00000370228 CCDC40Q4G0X9 1142 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms