RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 SERPINB13Q9UIV8 391 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 C10orf71Q711Q0 1435 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 TOP1P11387 765 aaKnown RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 PFKFB3Q16875 520 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 C11orf57Q6ZUT1 292 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 FMR1NBQ8N0W7 255 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 CABP5Q9NP86 173 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 MTMR7Q9Y216 660 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 SNED1Q8TER0 1413 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 BAZ2BQ9UIF8 2168 aaKnown RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 SMC2O95347 1197 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 MYCNP04198 464 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 NLRP5P59047 1200 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 AXDND1Q5T1B0 1012 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 OXER1Q8TDS5 423 aa11.34□□□□□ -0.59
PRPF38B-203ENST00000370025 CUTAO60888 179 aa11.33□□□□□ -0.59
PRPF38B-203ENST00000370025 NDUFA8P51970 172 aa11.33□□□□□ -0.59
PRPF38B-203ENST00000370025 GABPAQ06546 454 aa11.33□□□□□ -0.59
PRPF38B-203ENST00000370025 SLC20A2Q08357 652 aa11.33□□□□□ -0.59
PRPF38B-203ENST00000370025 PLA2G4DQ86XP0 818 aa11.33□□□□□ -0.59
PRPF38B-203ENST00000370025 CEP95Q96GE4 821 aa11.33□□□□□ -0.59
PRPF38B-203ENST00000370025 TSPYL1Q9H0U9 437 aa11.33□□□□□ -0.59
PRPF38B-203ENST00000370025 MAD2L2Q9UI95 211 aa11.33□□□□□ -0.59
PRPF38B-203ENST00000370025 STAG2Q8N3U4 1231 aa11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 CAVIN2O95810 425 aa11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 PARP1P09874 1014 aaKnown RBP11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 CALML3P27482 149 aa11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 TOB1P50616 345 aaPredicted RBP11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 KRI1Q8N9T8 703 aaKnown RBP11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 MYO3BQ8WXR4 1341 aa11.33□□□□□ -0.6
PRPF38B-203ENST00000370025 PALM3A6NDB9 673 aaPredicted RBP11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 SCN9AQ15858 1988 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 DHX36Q9H2U1 1008 aaKnown RBP11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 SH3GLB2Q9NR46 395 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 PHACTR2O75167 634 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 ZNF202O95125 648 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 PFKFB1P16118 471 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 DPEP1P16444 411 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 TPM4P67936 248 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 GOLGA8FQ08AF8 430 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 GOLGA8DPQ0D2H9 430 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 GPS2Q13227 327 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 CARD6Q9BX69 1037 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 MYH8P13535 1937 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 TRIM75PA6NK02 468 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 KLRF2D3W0D1 207 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 SHISA4Q96DD7 197 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 PSMD1Q99460 953 aa11.32□□□□□ -0.6
PRPF38B-203ENST00000370025 PLIN4Q96Q06 1357 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 BMP15O95972 392 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 SYKP43405 635 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 NFIAQ12857 509 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 TEX2Q8IWB9 1127 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 ARGLU1Q9NWB6 273 aaPredicted RBP11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 MTMR4Q9NYA4 1195 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 PCDHB6Q9Y5E3 794 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 AKR1B1P15121 316 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 TMC6Q7Z403 805 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 ZSCAN29Q8IWY8 852 aaPredicted RBP11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 TXLNBQ8N3L3 684 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 AOPEPQ8N6M6 819 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 IDI2Q9BXS1 227 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 EHD4Q9H223 541 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 CASQ1P31415 396 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 NOVP48745 357 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 MCM6Q14566 821 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 STX1AQ16623 288 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 SOGA3Q5TF21 947 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 RESP18Q5W5W9 173 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 DHX37Q8IY37 1157 aaKnown RBP11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 CCDC148Q8NFR7 591 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 CCDC17Q96LX7 622 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 ADAMTSL1Q8N6G6 1762 aa11.31□□□□□ -0.6
PRPF38B-203ENST00000370025 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 TCP10Q12799 353 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 SMC1AQ14683 1233 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 FOXR1Q6PIV2 292 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 SHC4Q6S5L8 630 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 NYAP1Q6ZVC0 841 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 CLIC6Q96NY7 704 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 RRP15Q9Y3B9 282 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 GOLGA8HP0CJ92 632 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 PTPREP23469 700 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 ANO10Q9NW15 660 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 PI4KBQ9UBF8 816 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 YDJCA8MPS7 323 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 SASH3O75995 380 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 TTLL1O95922 423 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 POLD1P28340 1107 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 SHMT1P34896 483 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 CACNB3P54284 484 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 CCZ1BP86790 482 aa11.3□□□□□ -0.6
PRPF38B-203ENST00000370025 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms