RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.79□□□□□ -1.48
UBE3D-202ENST00000369746 POLKQ9UBT6 870 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 IKBKGQ9Y6K9 419 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 ABCC12Q96J65 1359 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 ST20-MTHFSA0A0A6YYL1 179 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TMCO5BA8MYB1 307 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 PPFIA2O75334 1257 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 GJB1P08034 283 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 MTHFSP49914 203 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 SEC13P55735 322 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 GPS2Q13227 327 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TCIRG1Q13488 830 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TAF1CQ15572 869 aaPredicted RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TMEM95Q3KNT9 176 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 SLC4A10Q6U841 1118 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 MMS22LQ6ZRQ5 1243 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 APOBEC3FQ8IUX4 373 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TNPO1Q92973 898 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TATDN2Q93075 761 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 PAWRQ96IZ0 340 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 IWS1Q96ST2 819 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 RBM42Q9BTD8 480 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 BABAM1Q9NWV8 329 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 ZMIZ1Q9ULJ6 1067 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 SMTNL1A8MU46 457 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 SCAMP3O14828 347 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 PLIN1O60240 522 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 KRT18P05783 430 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 MYL3P08590 195 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 RWDD2BP57060 319 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 GRM1Q13255 1194 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TSGA10IPQ3SY00 556 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TBC1D9BQ66K14 1250 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 ZNF397Q8NF99 534 aaPredicted RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TDRD7Q8NHU6 1098 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 ATXN2LQ8WWM7 1075 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 JPH3Q8WXH2 748 aaPredicted RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 MMTAG2Q9BU76 263 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 UTP14AQ9BVJ6 771 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 LUZP4Q9P127 313 aa5.78□□□□□ -1.48
UBE3D-202ENST00000369746 TFIP11Q9UBB9 837 aaKnown RBP5.78□□□□□ -1.48
UBE3D-202ENST00000369746 ATP8B1O43520 1251 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 DIAPH1O60610 1272 aaKnown RBP5.77□□□□□ -1.49
UBE3D-202ENST00000369746 EPS15P42566 896 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 KIAA1614Q5VZ46 1190 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TTLL5Q6EMB2 1281 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 CCSAPQ6IQ19 270 aaPredicted RBP5.77□□□□□ -1.49
UBE3D-202ENST00000369746 KCNV1Q6PIU1 500 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 SRLQ86TD4 932 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TRIM74Q86UV6 250 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TRIM73Q86UV7 250 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 EFCAB13Q8IY85 973 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TEX19Q8NA77 164 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TESK2Q96S53 571 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 KIF2CQ99661 725 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 RYDENQ9NUL5 291 aaKnown RBP5.77□□□□□ -1.49
UBE3D-202ENST00000369746 HOXC10Q9NYD6 342 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 MAGED1Q9Y5V3 778 aaPredicted RBP5.77□□□□□ -1.49
UBE3D-202ENST00000369746 CCDC163A0A0D9SF12 145 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 A6NJY4 79 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TMEM110-MUSTN1A8MSY1 372 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 H0YGN5 161 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 RNMTO43148 476 aaKnown RBP5.77□□□□□ -1.49
UBE3D-202ENST00000369746 CSPG5O95196 566 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 IVLP07476 585 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 MMEP08473 750 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 EPB42P16452 691 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 NUBP1P53384 320 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 RBL2Q08999 1139 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 MRPL58Q14197 206 aaKnown RBP5.77□□□□□ -1.49
UBE3D-202ENST00000369746 RAB3GAP1Q15042 981 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TJAP1Q5JTD0 557 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 AKNAD1Q5T1N1 836 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 WWC2Q6AWC2 1192 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 CCBE1Q6UXH8 406 aaPredicted RBP5.77□□□□□ -1.49
UBE3D-202ENST00000369746 SULF1Q8IWU6 871 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TRMT44Q8IYL2 757 aaKnown RBP5.77□□□□□ -1.49
UBE3D-202ENST00000369746 GOLGA5Q8TBA6 731 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 C17orf50Q8WW18 174 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TEKT1Q969V4 418 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 SNX27Q96L92 541 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 SH3GL3Q99963 347 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 CRISPLD2Q9H0B8 497 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 TMX1Q9H3N1 280 aa5.77□□□□□ -1.49
UBE3D-202ENST00000369746 SPTLC2O15270 562 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 RPS6KA5O75582 802 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 TRPA1O75762 1119 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 GMPSP49915 693 aaPredicted RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 NUCB1Q02818 461 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 ACBD5Q5T8D3 534 aaPredicted RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 IQCEQ6IPM2 695 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 PXYLP1Q8TE99 480 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 RNPC3Q96LT9 517 aaKnown RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 C9orf78Q9NZ63 289 aaPredicted RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 PPP1R9AQ9ULJ8 1098 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 ARAP2Q8WZ64 1704 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 RHOBTB3O94955 611 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 BAG4O95429 457 aaKnown RBP5.76□□□□□ -1.49
UBE3D-202ENST00000369746 SCGB1D2O95969 90 aa5.76□□□□□ -1.49
UBE3D-202ENST00000369746 TPM1P09493 284 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms