RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
PHTF1-202ENST00000369598 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 MAP2K7O14733 419 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 EIF3JO75822 258 aaKnown RBP17.14■□□□□ 0.33
PHTF1-202ENST00000369598 GTF2IP78347 998 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 COA1Q9GZY4 146 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 MCM9Q9NXL9 1143 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 PRDM1O75626 825 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 CORO7P57737 925 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 GPIHBP1Q8IV16 184 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 MTA3Q9BTC8 594 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 MYL10Q9BUA6 226 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 CXorf56Q9H5V9 222 aa17.14■□□□□ 0.33
PHTF1-202ENST00000369598 BAZ2AQ9UIF9 1905 aaKnown RBP17.14■□□□□ 0.33
PHTF1-202ENST00000369598 GOLGA8AA7E2F4 631 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 UBE2Q2LH0YL09 131 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 TEX33O43247 280 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 ATP8B1O43520 1251 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 CDKL5O76039 1030 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 PCP11498 1178 aaKnown RBP17.13■□□□□ 0.33
PHTF1-202ENST00000369598 BAG6P46379 1132 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 PSEN1P49768 467 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 SRGAP1Q7Z6B7 1085 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 SLC35F6Q8N357 371 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 TC2NQ8N9U0 490 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 SH3RF3Q8TEJ3 882 aaPredicted RBP17.13■□□□□ 0.33
PHTF1-202ENST00000369598 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 NFE2L3Q9Y4A8 694 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 PCDHA5Q9Y5H7 936 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 FOXP4Q8IVH2 680 aaPredicted RBP17.13■□□□□ 0.33
PHTF1-202ENST00000369598 JPH2Q9BR39 696 aaPredicted RBP17.13■□□□□ 0.33
PHTF1-202ENST00000369598 YY1AP1Q9H869 796 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
PHTF1-202ENST00000369598 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 SRGAP2O75044 1071 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 PPP4CP60510 307 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 SLF2Q8IX21 1173 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
PHTF1-202ENST00000369598 RGPD3A6NKT7 1758 aaPredicted RBP17.12■□□□□ 0.33
PHTF1-202ENST00000369598 RGPD4Q7Z3J3 1758 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 TIAM2Q8IVF5 1701 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 ERLIN2O94905 339 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 CASP1P29466 404 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 SBK1Q52WX2 424 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 TADA2BQ86TJ2 420 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 CENPHQ9H3R5 247 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 MAP2K2P36507 400 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
PHTF1-202ENST00000369598 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 RAD9BQ6WBX8 426 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 DEFB132Q7Z7B7 95 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 IQCA1Q86XH1 822 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 HDAC6Q9UBN7 1215 aa17.12■□□□□ 0.33
PHTF1-202ENST00000369598 ERLIN1O75477 346 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 USP17L8P0C7I0 530 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 CYP2D6P10635 497 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 CDC25AP30304 524 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 SLC4A8Q2Y0W8 1093 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 TGFBRAP1Q8WUH2 860 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
PHTF1-202ENST00000369598 TRIM10Q9UDY6 481 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 H0YHG0 523 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 KIF5CO60282 957 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 BTDP43251 543 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 BRD3Q15059 726 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 MYSM1Q5VVJ2 828 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 ZSCAN10Q96SZ4 725 aaPredicted RBP17.11■□□□□ 0.33
PHTF1-202ENST00000369598 EYA3Q99504 573 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 FAM205AQ6ZU69 1335 aa17.11■□□□□ 0.33
PHTF1-202ENST00000369598 FRMD3A2A2Y4 597 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 FGRP09769 529 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 CHRNA5P30532 468 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 KCTD19Q17RG1 926 aaPredicted RBP17.1■□□□□ 0.33
PHTF1-202ENST00000369598 IGSF22Q8N9C0 903 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 TNKSO95271 1327 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 MAST2Q6P0Q8 1798 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 CBFA2T2O43439 604 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 BMP6P22004 513 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
PHTF1-202ENST00000369598 EVX2Q03828 476 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 RTFDC1Q9BY42 306 aaPredicted RBP17.1■□□□□ 0.33
PHTF1-202ENST00000369598 CCDC175P0C221 793 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 CHRM1P11229 460 aaPredicted RBP17.1■□□□□ 0.33
PHTF1-202ENST00000369598 KIRREL3Q8IZU9 778 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 NUP133Q8WUM0 1156 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 PHKBQ93100 1093 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
PHTF1-202ENST00000369598 LRRC37AA6NMS7 1700 aa17.09■□□□□ 0.33
PHTF1-202ENST00000369598 GPR75-ASB3A0A0A6YYF3 556 aa17.09■□□□□ 0.33
PHTF1-202ENST00000369598 MCTP2Q6DN12 878 aa17.09■□□□□ 0.33
PHTF1-202ENST00000369598 MMS22LQ6ZRQ5 1243 aa17.09■□□□□ 0.33
PHTF1-202ENST00000369598 SMYD4Q8IYR2 804 aaPredicted RBP17.09■□□□□ 0.33
PHTF1-202ENST00000369598 CNKSR1Q969H4 720 aa17.09■□□□□ 0.33
PHTF1-202ENST00000369598 RTEL1Q9NZ71 1219 aa17.09■□□□□ 0.33
PHTF1-202ENST00000369598 C12orf60Q5U649 245 aa17.09■□□□□ 0.33
PHTF1-202ENST00000369598 ANO1Q5XXA6 986 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms