RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 MRPS27Q92552 414 aaKnown RBP12.15□□□□□ -0.47
TPM3-212ENST00000368533 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 ANO10Q9NW15 660 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 ZNRF3Q9ULT6 936 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 SUGT1Q9Y2Z0 365 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 ECM29Q5VYK3 1845 aa12.15□□□□□ -0.47
TPM3-212ENST00000368533 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 PIK3AP1Q6ZUJ8 805 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 NOSTRINQ8IVI9 506 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 CEP57L1Q8IYX8 460 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 RNF26Q9BY78 433 aaPredicted RBP12.14□□□□□ -0.47
TPM3-212ENST00000368533 FEZ2Q9UHY8 353 aaPredicted RBP12.14□□□□□ -0.47
TPM3-212ENST00000368533 PTGER2P43116 358 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 TNNT3P45378 269 aaPredicted RBP12.14□□□□□ -0.47
TPM3-212ENST00000368533 TOB1P50616 345 aaPredicted RBP12.14□□□□□ -0.47
TPM3-212ENST00000368533 GABPAQ06546 454 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 ZNF174Q15697 407 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
TPM3-212ENST00000368533 MTMR4Q9NYA4 1195 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 ZNF215Q9UL58 517 aaPredicted RBP12.14□□□□□ -0.47
TPM3-212ENST00000368533 ROBO3Q96MS0 1386 aa12.14□□□□□ -0.47
TPM3-212ENST00000368533 TULP2O00295 520 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 PARP1P09874 1014 aaKnown RBP12.13□□□□□ -0.47
TPM3-212ENST00000368533 CALM1P0DP23 149 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 CALM2P0DP24 149 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 CALM3P0DP25 149 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 NDUFA8P51970 172 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 ELF2Q15723 593 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 FBXO38Q6PIJ6 1188 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 RBM43Q6ZSC3 357 aaKnown RBP12.13□□□□□ -0.47
TPM3-212ENST00000368533 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 PDILTQ8N807 584 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 WASF1Q92558 559 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 PIGSQ96S52 555 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 PSMD1Q99460 953 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
TPM3-212ENST00000368533 CALCOCO1Q9P1Z2 691 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 SERPINA10Q9UK55 444 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 GH2P01242 217 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 SCG2P13521 617 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 KIF5BP33176 963 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 TGFB2P61812 414 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 ARID5BQ14865 1188 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 DLK2Q6UY11 383 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 CCDC125Q86Z20 511 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 CACTINQ8WUQ7 758 aaKnown RBP12.13□□□□□ -0.47
TPM3-212ENST00000368533 COA7Q96BR5 231 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
TPM3-212ENST00000368533 CAVIN2O95810 425 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 CCDC144BQ3MJ40 725 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 BRAPQ7Z569 592 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 PLA2G4DQ86XP0 818 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 NEK11Q8NG66 645 aa12.13□□□□□ -0.47
TPM3-212ENST00000368533 NAT10Q9H0A0 1025 aaKnown RBP12.13□□□□□ -0.47
TPM3-212ENST00000368533 ZNF70Q9UC06 446 aaPredicted RBP12.13□□□□□ -0.47
TPM3-212ENST00000368533 GYS2P54840 703 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 IKQ13123 557 aaPredicted RBP12.12□□□□□ -0.47
TPM3-212ENST00000368533 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
TPM3-212ENST00000368533 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 CIAPIN1Q6FI81 312 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 RTEL1Q9NZ71 1219 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 TMOD2Q9NZR1 351 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 STK36Q9NRP7 1315 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 SMTNL1A8MU46 457 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 SMC2O95347 1197 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 VIL1P09327 827 aaKnown RBP12.12□□□□□ -0.47
TPM3-212ENST00000368533 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
TPM3-212ENST00000368533 KRT2P35908 639 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 RAD51AP2Q09MP3 1159 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 GRM4Q14833 912 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 TRMT1Q9NXH9 659 aaKnown RBP12.12□□□□□ -0.47
TPM3-212ENST00000368533 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 HDAC9Q9UKV0 1011 aa12.12□□□□□ -0.47
TPM3-212ENST00000368533 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 PDHBP11177 359 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
TPM3-212ENST00000368533 IQCB1Q15051 598 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 USP49Q70CQ1 688 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
TPM3-212ENST00000368533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.11□□□□□ -0.47
TPM3-212ENST00000368533 RSPH14Q9UHP6 348 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 WNT10BO00744 389 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 POLR3GO15318 223 aaPredicted RBP12.11□□□□□ -0.47
TPM3-212ENST00000368533 XBP1P17861 261 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 MCM7P33993 719 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 ECE1P42892 770 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 DGKZQ13574 1117 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 PRKG1Q13976 671 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 SGIP1Q9BQI5 828 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 TRIM66O15016 1216 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 TTLL1O95922 423 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 CDC25AP30304 524 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 ADALQ6DHV7 355 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.11□□□□□ -0.47
TPM3-212ENST00000368533 KCNG4Q8TDN1 519 aa12.11□□□□□ -0.47
TPM3-212ENST00000368533 PHF20Q9BVI0 1012 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms