RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 UBXN2AP68543 259 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
PTPRK-203ENST00000368207 JAKMIP2Q96AA8 810 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 KCNJ18B7U540 433 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 GTPBP6O43824 516 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-203ENST00000368207 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 MORC3Q14149 939 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 KCNJ12Q14500 433 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 SLC9C1Q4G0N8 1177 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 MIER3Q7Z3K6 550 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 AMNQ9BXJ7 453 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 AGLP35573 1532 aa13.69□□□□□ -0.22
PTPRK-203ENST00000368207 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 SMC1AQ14683 1233 aaKnown RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 ASIC2Q16515 512 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 NUP58Q9BVL2 599 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 MRPL11Q9Y3B7 192 aaKnown RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 CSADQ9Y600 493 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 EZRP15311 586 aaKnown RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 RRAGAQ7L523 313 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 CCDC84Q86UT8 332 aaPredicted RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 SMYD4Q8IYR2 804 aaPredicted RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 MYOCDQ8IZQ8 938 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 SH3RF3Q8TEJ3 882 aaPredicted RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 NAPGQ99747 312 aaPredicted RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 DESI2Q9BSY9 194 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 FSD2A1L4K1 749 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 DKC1O60832 514 aaKnown RBP eCLIP13.68□□□□□ -0.229e-7■■■■■ 28.8
PTPRK-203ENST00000368207 NPR1P16066 1061 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 STRN3Q13033 797 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 RABL6Q3YEC7 729 aaPredicted RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 ASPRV1Q53RT3 343 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 PCDHA4Q9UN74 947 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 CEP83Q9Y592 693 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 PCDHB6Q9Y5E3 794 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 RPN1P04843 607 aaKnown RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 LONP1P36776 959 aaKnown RBP13.68□□□□□ -0.22
PTPRK-203ENST00000368207 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
PTPRK-203ENST00000368207 CPDO75976 1380 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 NEDD4P46934 1319 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 KDM3AQ9Y4C1 1321 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 PPP6R2O75170 966 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 CDK8P49336 464 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 DCAF15Q66K64 600 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 C11orf57Q6ZUT1 292 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-203ENST00000368207 CYB5R4Q7L1T6 521 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 PLA2G4DQ86XP0 818 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 SMCR8Q8TEV9 937 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-203ENST00000368207 SWAP70Q9UH65 585 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 KLHL30Q0D2K2 578 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 GSTA5Q7RTV2 222 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 TMEM87AQ8NBN3 555 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 TBCKQ8TEA7 893 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 AZI2Q9H6S1 392 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 KANSL2Q9H9L4 492 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 STK24Q9Y6E0 443 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 CYP2J2P51589 502 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 RNF187Q5TA31 235 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-203ENST00000368207 TYW1BQ6NUM6 668 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 SLC44A5Q8NCS7 719 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 EXOC7Q9UPT5 735 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 C21orf2O43822 256 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 ARHGEF16Q5VV41 709 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 TRIML1Q8N9V2 468 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 TSGA10Q9BZW7 698 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 CPVLQ9H3G5 476 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 CD209Q9NNX6 404 aa13.67□□□□□ -0.22
PTPRK-203ENST00000368207 GLG1Q92896 1179 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 ERO1AQ96HE7 468 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 COA1Q9GZY4 146 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 NRBP1Q9UHY1 535 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 RASAL2Q9UJF2 1139 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 KIAA1024Q9UPX6 916 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 RIPOR2Q9Y4F9 1068 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 SPOPO43791 374 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 U2AF2P26368 475 aaKnown RBP eCLIP13.66□□□□□ -0.229e-7■■□□□ 13.8
PTPRK-203ENST00000368207 TTC16Q8NEE8 873 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 BRIP1Q9BX63 1249 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 PRPF3O43395 683 aaKnown RBP13.66□□□□□ -0.22
PTPRK-203ENST00000368207 TRAPPC10P48553 1259 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 VAV2P52735 878 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 FAM26FQ5R3K3 315 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 SPATA1Q5VX52 437 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 GJD4Q96KN9 370 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-203ENST00000368207 TTC14Q96N46 770 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
PTPRK-203ENST00000368207 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 NMT2O60551 498 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 NFIXQ14938 502 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
PTPRK-203ENST00000368207 PANK4Q9NVE7 773 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms