RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 PGK2P07205 417 aa17.62■□□□□ 0.41
CTSD-202ENST00000367196 ATN1P54259 1190 aaPredicted RBP17.62■□□□□ 0.41
CTSD-202ENST00000367196 OAZ1P54368 228 aa17.62■□□□□ 0.41
CTSD-202ENST00000367196 HDAC1Q13547 482 aaPredicted RBP17.62■□□□□ 0.41
CTSD-202ENST00000367196 ZNF792Q3KQV3 632 aa17.62■□□□□ 0.41
CTSD-202ENST00000367196 LRIT3Q3SXY7 679 aa17.62■□□□□ 0.41
CTSD-202ENST00000367196 NEDD1Q8NHV4 660 aa17.62■□□□□ 0.41
CTSD-202ENST00000367196 OTUD7AQ8TE49 926 aaPredicted RBP17.62■□□□□ 0.41
CTSD-202ENST00000367196 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
CTSD-202ENST00000367196 SEC62Q99442 399 aaKnown RBP17.62■□□□□ 0.41
CTSD-202ENST00000367196 AKR1A1P14550 325 aa17.61■□□□□ 0.41
CTSD-202ENST00000367196 RTP1P59025 263 aa17.61■□□□□ 0.41
CTSD-202ENST00000367196 RNF180Q86T96 592 aa17.61■□□□□ 0.41
CTSD-202ENST00000367196 KIFC2Q96AC6 838 aa17.61■□□□□ 0.41
CTSD-202ENST00000367196 CRBNQ96SW2 442 aa17.61■□□□□ 0.41
CTSD-202ENST00000367196 SLC38A10Q9HBR0 1119 aa17.61■□□□□ 0.41
CTSD-202ENST00000367196 XPNPEP3Q9NQH7 507 aa17.61■□□□□ 0.41
CTSD-202ENST00000367196 ISY1Q9ULR0 285 aaKnown RBP17.61■□□□□ 0.41
CTSD-202ENST00000367196 SALL3Q9BXA9 1300 aa17.61■□□□□ 0.41
CTSD-202ENST00000367196 BMP3P12645 472 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 STAT2P52630 851 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 TFAP4Q01664 338 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 LRRC41Q15345 812 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 FAM47AQ5JRC9 791 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 PRAMEF19Q5SWL8 479 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 ANO1Q5XXA6 986 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 SLFN13Q68D06 897 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 CPXCR1Q8N123 301 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 LRRC47Q8N1G4 583 aaKnown RBP17.6■□□□□ 0.41
CTSD-202ENST00000367196 CHST13Q8NET6 341 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 ATP11BQ9Y2G3 1177 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 SYNGAP1Q96PV0 1343 aa17.6■□□□□ 0.41
CTSD-202ENST00000367196 TSPY2A6NKD2 308 aa17.59■□□□□ 0.41
CTSD-202ENST00000367196 SOX1O00570 391 aaPredicted RBP17.59■□□□□ 0.41
CTSD-202ENST00000367196 MDM2Q00987 491 aaPredicted RBP17.59■□□□□ 0.41
CTSD-202ENST00000367196 IKQ13123 557 aaPredicted RBP17.59■□□□□ 0.41
CTSD-202ENST00000367196 SLC39A5Q6ZMH5 540 aa17.59■□□□□ 0.41
CTSD-202ENST00000367196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.41
CTSD-202ENST00000367196 ZNF467Q7Z7K2 595 aaPredicted RBP17.59■□□□□ 0.41
CTSD-202ENST00000367196 FAM160B2Q86V87 743 aa17.59■□□□□ 0.41
CTSD-202ENST00000367196 ANKRD35Q8N283 1001 aa17.59■□□□□ 0.41
CTSD-202ENST00000367196 CHURC1Q8WUH1 139 aa17.59■□□□□ 0.41
CTSD-202ENST00000367196 LRCH3Q96II8 777 aa17.59■□□□□ 0.41
CTSD-202ENST00000367196 GMCL1Q96IK5 515 aa17.59■□□□□ 0.41
CTSD-202ENST00000367196 HELLSQ9NRZ9 838 aa17.59■□□□□ 0.41
CTSD-202ENST00000367196 SLC1A4P43007 532 aa17.58■□□□□ 0.4
CTSD-202ENST00000367196 PDE1AP54750 535 aa17.58■□□□□ 0.4
CTSD-202ENST00000367196 SNX17Q15036 470 aa17.58■□□□□ 0.4
CTSD-202ENST00000367196 C1orf53Q5VUE5 145 aa17.58■□□□□ 0.4
CTSD-202ENST00000367196 PHF24Q9UPV7 400 aa17.58■□□□□ 0.4
CTSD-202ENST00000367196 SMCHD1A6NHR9 2005 aa17.57■□□□□ 0.4
CTSD-202ENST00000367196 ADCYAP1R1P41586 468 aa17.57■□□□□ 0.4
CTSD-202ENST00000367196 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
CTSD-202ENST00000367196 MAMDC4Q6UXC1 1216 aa17.57■□□□□ 0.4
CTSD-202ENST00000367196 RAVER2Q9HCJ3 691 aaKnown RBP17.57■□□□□ 0.4
CTSD-202ENST00000367196 ANAPC4Q9UJX5 808 aa17.57■□□□□ 0.4
CTSD-202ENST00000367196 FAM184BQ9ULE4 1060 aa17.57■□□□□ 0.4
CTSD-202ENST00000367196 STX8Q9UNK0 236 aa17.57■□□□□ 0.4
CTSD-202ENST00000367196 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTSD-202ENST00000367196 LTBP2Q14767 1821 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 DNAJC25-GNG10A0A024R161 153 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 TMEM232C9JQI7 657 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 PLA2G6O60733 806 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 ZNF865P0CJ78 1059 aaPredicted RBP17.56■□□□□ 0.4
CTSD-202ENST00000367196 TKFCQ3LXA3 575 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 CCDC129Q6ZRS4 1044 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 STAG1Q8WVM7 1258 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 ACAD9Q9H845 621 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 PRDM5Q9NQX1 630 aaPredicted RBP17.56■□□□□ 0.4
CTSD-202ENST00000367196 RIPK3Q9Y572 518 aa17.56■□□□□ 0.4
CTSD-202ENST00000367196 ZMYM6O95789 1325 aa17.55■□□□□ 0.4
CTSD-202ENST00000367196 ORC4O43929 436 aa17.55■□□□□ 0.4
CTSD-202ENST00000367196 RANBP6O60518 1105 aaKnown RBP17.55■□□□□ 0.4
CTSD-202ENST00000367196 MFAP1P55081 439 aaKnown RBP17.55■□□□□ 0.4
CTSD-202ENST00000367196 ALX1Q15699 326 aa17.55■□□□□ 0.4
CTSD-202ENST00000367196 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
CTSD-202ENST00000367196 TSEN34Q9BSV6 310 aaKnown RBP17.55■□□□□ 0.4
CTSD-202ENST00000367196 ABHD16BQ9H3Z7 469 aa17.55■□□□□ 0.4
CTSD-202ENST00000367196 RWDD1Q9H446 243 aaPredicted RBP17.55■□□□□ 0.4
CTSD-202ENST00000367196 SPC25Q9HBM1 224 aa17.55■□□□□ 0.4
CTSD-202ENST00000367196 ZHX1Q9UKY1 873 aaPredicted RBP17.55■□□□□ 0.4
CTSD-202ENST00000367196 MOXD2PA6NHM9 499 aa17.54■□□□□ 0.4
CTSD-202ENST00000367196 PGK1P00558 417 aa17.54■□□□□ 0.4
CTSD-202ENST00000367196 CTDSPL2Q05D32 466 aa17.54■□□□□ 0.4
CTSD-202ENST00000367196 MCMDC2Q4G0Z9 681 aa17.54■□□□□ 0.4
CTSD-202ENST00000367196 NUP133Q8WUM0 1156 aa17.54■□□□□ 0.4
CTSD-202ENST00000367196 FERMT2Q96AC1 680 aa17.54■□□□□ 0.4
CTSD-202ENST00000367196 TOMM22Q9NS69 142 aa17.54■□□□□ 0.4
CTSD-202ENST00000367196 PCP11498 1178 aaKnown RBP17.53■□□□□ 0.4
CTSD-202ENST00000367196 TAL1P17542 331 aaPredicted RBP17.53■□□□□ 0.4
CTSD-202ENST00000367196 MCCP23508 829 aa17.53■□□□□ 0.4
CTSD-202ENST00000367196 DEFB123Q8N688 67 aa17.53■□□□□ 0.4
CTSD-202ENST00000367196 HOMER2Q9NSB8 354 aa17.53■□□□□ 0.4
CTSD-202ENST00000367196 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.53■□□□□ 0.4
CTSD-202ENST00000367196 TACC3Q9Y6A5 838 aa17.53■□□□□ 0.4
CTSD-202ENST00000367196 SYNRGQ9UMZ2 1314 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 A0A1W2PQ45 241 aaPredicted RBP17.52■□□□□ 0.4
CTSD-202ENST00000367196 A0A1W2PQY0 241 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 TRIM6-TRIM34B2RNG4 842 aa17.52■□□□□ 0.4
CTSD-202ENST00000367196 POTEB2H3BUK9 544 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms