RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MROH5Q6ZUA9 1318 aa15.45■□□□□ 0.06
COL6A1-201ENST00000361866 HIBADHP31937 336 aaKnown RBP15.45■□□□□ 0.06
COL6A1-201ENST00000361866 GRIN1Q05586 938 aa15.45■□□□□ 0.06
COL6A1-201ENST00000361866 PAK2Q13177 524 aa15.45■□□□□ 0.06
COL6A1-201ENST00000361866 CCDC84Q86UT8 332 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-201ENST00000361866 PNMA8AQ86V59 439 aaPredicted RBP15.45■□□□□ 0.06
COL6A1-201ENST00000361866 RPGRIP1Q96KN7 1286 aa15.45■□□□□ 0.06
COL6A1-201ENST00000361866 PARP3Q9Y6F1 533 aa15.45■□□□□ 0.06
COL6A1-201ENST00000361866 MROH7-TTC4A0A0A0MT08 1334 aa15.45■□□□□ 0.06
COL6A1-201ENST00000361866 FAM205CA6NFA0 338 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 EHHADHQ08426 723 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 CUL4BQ13620 913 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 RASGRF1Q13972 1273 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 ATG9AQ7Z3C6 839 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 PNMA1Q8ND90 353 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 CNOT6LQ96LI5 555 aaKnown RBP15.44■□□□□ 0.06
COL6A1-201ENST00000361866 RNF26Q9BY78 433 aaPredicted RBP15.44■□□□□ 0.06
COL6A1-201ENST00000361866 DDB1Q16531 1140 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 CCDC91Q7Z6B0 441 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 REREQ9P2R6 1566 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 LIFRP42702 1097 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 TMEM132AQ24JP5 1023 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 KRT71Q3SY84 523 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 KCNK3O14649 394 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 PLA2G4AP47712 749 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 DAAM2Q86T65 1068 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 UHMK1Q8TAS1 419 aaKnown RBP15.44■□□□□ 0.06
COL6A1-201ENST00000361866 PLEKHG1Q9ULL1 1385 aa15.44■□□□□ 0.06
COL6A1-201ENST00000361866 GJC1P36383 396 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
COL6A1-201ENST00000361866 RIN2Q8WYP3 895 aaPredicted RBP15.43■□□□□ 0.06
COL6A1-201ENST00000361866 HYOU1Q9Y4L1 999 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 SMCO2A6NFE2 343 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 CETN1Q12798 172 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 RPS6KA1Q15418 735 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 KCNK9Q9NPC2 374 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.43■□□□□ 0.06
COL6A1-201ENST00000361866 CD163L1Q9NR16 1453 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 NAA25Q14CX7 972 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 LRRC41Q15345 812 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 NAA35Q5VZE5 725 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 ANKS4BQ8N8V4 417 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 TTLL11Q8NHH1 800 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 TGFBRAP1Q8WUH2 860 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.43■□□□□ 0.062e-6■■■■■ 149.1
COL6A1-201ENST00000361866 JRKLQ9Y4A0 524 aa15.43■□□□□ 0.06
COL6A1-201ENST00000361866 NRXN1Q9ULB1 1477 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 RBM43Q6ZSC3 357 aaKnown RBP15.42■□□□□ 0.06
COL6A1-201ENST00000361866 TC2NQ8N9U0 490 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 ERVV-2B6SEH9 535 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 MOCS3O95396 460 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 ABHD10Q9NUJ1 306 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 NRKQ7Z2Y5 1582 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 NBPF26B4DH59 902 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 POLR2FP61218 127 aaKnown RBP15.42■□□□□ 0.06
COL6A1-201ENST00000361866 CHRNDQ07001 517 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 HLFQ16534 295 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 SFMBT2Q5VUG0 894 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 NBPF10Q6P3W6 841 aaKnown RBP15.42■□□□□ 0.06
COL6A1-201ENST00000361866 RAD9BQ6WBX8 426 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 KSR1Q8IVT5 923 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 NBPF15Q8N660 670 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 CHP1Q99653 195 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 NEXMIFQ5QGS0 1516 aa15.42■□□□□ 0.06
COL6A1-201ENST00000361866 KIF4AO95239 1232 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 ANTXR2P58335 489 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 FOXO4P98177 505 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 ASIC2Q16515 512 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 CCDC65Q8IXS2 484 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 TEX11Q8IYF3 940 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 LMBR1Q8WVP7 490 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 TBC1D5Q92609 795 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 KRT12Q99456 494 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 EPB41L5Q9HCM4 733 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 FHOD1Q9Y613 1164 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 CETN3O15182 167 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 N4BP1O75113 896 aaKnown RBP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 TCP1P17987 556 aaKnown RBP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 CTNNA1P35221 906 aaKnown RBP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 FXR1P51114 621 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 MAP3K9P80192 1104 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 CALCRLQ16602 461 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 TCP11X2Q5H9J9 407 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 CUL5Q93034 780 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 DPH5Q9H2P9 285 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 TRIM10Q9UDY6 481 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 EIF3CLB5ME19 914 aaKnown RBP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 GRIPAP1Q4V328 841 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 REXO1Q8N1G1 1221 aaKnown RBP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 ERMNQ8TAM6 284 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 SMCR8Q8TEV9 937 aaPredicted RBP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 EIF3CQ99613 913 aaKnown RBP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 L2HGDHQ9H9P8 463 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 IFT88Q13099 833 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 KCNB2Q92953 911 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 LSM14BQ9BX40 385 aaKnown RBP15.41■□□□□ 0.06
COL6A1-201ENST00000361866 NHEJ1Q9H9Q4 299 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms