RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 SHC4Q6S5L8 630 aa23.14■■□□□ 1.3
CBWD3-201ENST00000360171 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.14■■□□□ 1.3
CBWD3-201ENST00000360171 SLC26A6Q9BXS9 759 aa23.14■■□□□ 1.3
CBWD3-201ENST00000360171 EHD4Q9H223 541 aa23.14■■□□□ 1.3
CBWD3-201ENST00000360171 PLIN4Q96Q06 1357 aa23.14■■□□□ 1.29
CBWD3-201ENST00000360171 CCDC196A0A1B0GTZ2 297 aa23.14■■□□□ 1.29
CBWD3-201ENST00000360171 CCDC82Q8N4S0 544 aa23.14■■□□□ 1.29
CBWD3-201ENST00000360171 SWAP70Q9UH65 585 aa23.14■■□□□ 1.29
CBWD3-201ENST00000360171 CLRN2A0PK11 232 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 PLEKHA8P1O95397 391 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 CALM1P0DP23 149 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 CALM2P0DP24 149 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 CALM3P0DP25 149 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 AKR1B1P15121 316 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 MARCKSP29966 332 aaPredicted RBP23.13■■□□□ 1.29
CBWD3-201ENST00000360171 FCHSD1Q86WN1 690 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 DHX36Q9H2U1 1008 aaKnown RBP23.13■■□□□ 1.29
CBWD3-201ENST00000360171 KAT14Q9H8E8 782 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 LMOD1P29536 600 aaPredicted RBP23.13■■□□□ 1.29
CBWD3-201ENST00000360171 SSRP1Q08945 709 aaKnown RBP23.13■■□□□ 1.29
CBWD3-201ENST00000360171 CCDC178Q5BJE1 867 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 CRACR2BQ8N4Y2 399 aaPredicted RBP23.13■■□□□ 1.29
CBWD3-201ENST00000360171 PNMA1Q8ND90 353 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 TMX1Q9H3N1 280 aa23.13■■□□□ 1.29
CBWD3-201ENST00000360171 ZNF70Q9UC06 446 aaPredicted RBP23.13■■□□□ 1.29
CBWD3-201ENST00000360171 ATRNL1Q5VV63 1379 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 PHLPP2Q6ZVD8 1323 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 COL2A1P02458 1487 aaPredicted RBP23.12■■□□□ 1.29
CBWD3-201ENST00000360171 MYH4Q9Y623 1939 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 UTRNP46939 3433 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 FAM196BA6NMK8 535 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 ENTPD3O75355 529 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 GUCY1A2P33402 732 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 FUT2Q10981 343 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 TNIP1Q15025 636 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 PPP2R5BQ15173 497 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 KRT222Q8N1A0 295 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 CEP95Q96GE4 821 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 STX8Q9UNK0 236 aa23.12■■□□□ 1.29
CBWD3-201ENST00000360171 BAZ2BQ9UIF8 2168 aaKnown RBP23.12■■□□□ 1.29
CBWD3-201ENST00000360171 FZD9O00144 591 aa23.11■■□□□ 1.29
CBWD3-201ENST00000360171 ELF2Q15723 593 aa23.11■■□□□ 1.29
CBWD3-201ENST00000360171 ZSCAN29Q8IWY8 852 aaPredicted RBP23.11■■□□□ 1.29
CBWD3-201ENST00000360171 MTMR14Q8NCE2 650 aa23.11■■□□□ 1.29
CBWD3-201ENST00000360171 ZBED3Q96IU2 234 aaPredicted RBP23.11■■□□□ 1.29
CBWD3-201ENST00000360171 TMEM47Q9BQJ4 181 aa23.11■■□□□ 1.29
CBWD3-201ENST00000360171 UBASH3AP57075 661 aa23.11■■□□□ 1.29
CBWD3-201ENST00000360171 TRIM29Q14134 588 aa23.11■■□□□ 1.29
CBWD3-201ENST00000360171 SPDYE2Q495Y8 402 aa23.11■■□□□ 1.29
CBWD3-201ENST00000360171 FBXO38Q6PIJ6 1188 aa23.11■■□□□ 1.29
CBWD3-201ENST00000360171 RBM28Q9NW13 759 aaKnown RBP23.11■■□□□ 1.29
CBWD3-201ENST00000360171 TCP10L2B9ZVM9 353 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 NOVP48745 357 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 ETF1P62495 437 aaKnown RBP23.1■■□□□ 1.29
CBWD3-201ENST00000360171 GNL2Q13823 731 aaKnown RBP23.1■■□□□ 1.29
CBWD3-201ENST00000360171 TMTC3Q6ZXV5 915 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 PI4KBQ9UBF8 816 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 IGKV6D-41A0A0C4DH26 115 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 SYT10Q6XYQ8 523 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 VSTM4Q8IW00 320 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 CTCFLQ8NI51 663 aaPredicted RBP23.1■■□□□ 1.29
CBWD3-201ENST00000360171 TAOK2Q9UL54 1235 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 CNTNAP1P78357 1384 aa23.1■■□□□ 1.29
CBWD3-201ENST00000360171 ATP1A3P13637 1013 aa23.09■■□□□ 1.29
CBWD3-201ENST00000360171 H2AFXP16104 143 aaPredicted RBP23.09■■□□□ 1.29
CBWD3-201ENST00000360171 KRBA2Q6ZNG9 492 aa23.09■■□□□ 1.29
CBWD3-201ENST00000360171 CLEC10AQ8IUN9 316 aa23.09■■□□□ 1.29
CBWD3-201ENST00000360171 WASF1Q92558 559 aa23.09■■□□□ 1.29
CBWD3-201ENST00000360171 MYOZ2Q9NPC6 264 aa23.09■■□□□ 1.29
CBWD3-201ENST00000360171 TMOD2Q9NZR1 351 aa23.09■■□□□ 1.29
CBWD3-201ENST00000360171 ZHX1Q9UKY1 873 aaPredicted RBP23.09■■□□□ 1.29
CBWD3-201ENST00000360171 ZNF541Q9H0D2 1346 aa23.09■■□□□ 1.29
CBWD3-201ENST00000360171 METTL16Q86W50 562 aaKnown RBP23.08■■□□□ 1.29
CBWD3-201ENST00000360171 TRIM22Q8IYM9 498 aa23.08■■□□□ 1.29
CBWD3-201ENST00000360171 HOOK1Q9UJC3 728 aaKnown RBP23.08■■□□□ 1.29
CBWD3-201ENST00000360171 CNTNAP5Q8WYK1 1306 aa23.08■■□□□ 1.29
CBWD3-201ENST00000360171 FAM193AP78312 1265 aa23.08■■□□□ 1.29
CBWD3-201ENST00000360171 NBPF9Q3BBW0 867 aa23.08■■□□□ 1.29
CBWD3-201ENST00000360171 ARHGAP27Q6ZUM4 889 aa23.08■■□□□ 1.29
CBWD3-201ENST00000360171 RASGRP2Q7LDG7 609 aa23.08■■□□□ 1.29
CBWD3-201ENST00000360171 SRBD1Q8N5C6 995 aaKnown RBP23.08■■□□□ 1.29
CBWD3-201ENST00000360171 SRRTQ9BXP5 876 aaKnown RBP23.08■■□□□ 1.29
CBWD3-201ENST00000360171 RNF26Q9BY78 433 aaPredicted RBP23.08■■□□□ 1.29
CBWD3-201ENST00000360171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.08■■□□□ 1.29
CBWD3-201ENST00000360171 WNT10BO00744 389 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 EGFRP00533 1210 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 SERPINC1P01008 464 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 GMPSP49915 693 aaPredicted RBP23.07■■□□□ 1.28
CBWD3-201ENST00000360171 EIF6P56537 245 aaKnown RBP23.07■■□□□ 1.28
CBWD3-201ENST00000360171 ZNF280AP59817 542 aaPredicted RBP23.07■■□□□ 1.28
CBWD3-201ENST00000360171 PNOCQ13519 176 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 SHROOM1Q2M3G4 852 aaPredicted RBP23.07■■□□□ 1.28
CBWD3-201ENST00000360171 SYT17Q9BSW7 474 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 MTMR4Q9NYA4 1195 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 KCNH3Q9ULD8 1083 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 GJA3Q9Y6H8 435 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 DEXIO95424 95 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 RPS12P25398 132 aaKnown RBP23.07■■□□□ 1.28
CBWD3-201ENST00000360171 GRM4Q14833 912 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 KRI1Q8N9T8 703 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms