RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MCM7P33993 719 aa14.45□□□□□ -0.1
GGPS1-202ENST00000358966 DALRD3Q5D0E6 543 aaKnown RBP14.45□□□□□ -0.1
GGPS1-202ENST00000358966 RILPL1Q5EBL4 403 aa14.45□□□□□ -0.1
GGPS1-202ENST00000358966 RBM26Q5T8P6 1007 aaKnown RBP14.45□□□□□ -0.1
GGPS1-202ENST00000358966 FBXO2Q9UK22 296 aaPredicted RBP14.45□□□□□ -0.1
GGPS1-202ENST00000358966 IGKV6D-41A0A0C4DH26 115 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 NBPF9Q3BBW0 867 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 HOMEZQ8IX15 550 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 NIM1KQ8IY84 436 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 GRAMD1CQ8IYS0 662 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 NUP88Q99567 741 aaPredicted RBP14.44□□□□□ -0.1
GGPS1-202ENST00000358966 IDI2Q9BXS1 227 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 STXBP3O00186 592 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 TTLL1O95922 423 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 CMA1P23946 247 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 SYKP43405 635 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 PRELPP51888 382 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 CERKLQ49MI3 558 aaPredicted RBP14.44□□□□□ -0.1
GGPS1-202ENST00000358966 MIGA2Q7L4E1 593 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 COA7Q96BR5 231 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 PDLIM2Q96JY6 352 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 TMEM39BQ9GZU3 492 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 CBX8Q9HC52 389 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 PI4KBQ9UBF8 816 aa14.44□□□□□ -0.1
GGPS1-202ENST00000358966 CCDC66A2RUB6 948 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 PPP6R2O75170 966 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 VIL1P09327 827 aaKnown RBP14.43□□□□□ -0.1
GGPS1-202ENST00000358966 EEF2P13639 858 aaKnown RBP14.43□□□□□ -0.1
GGPS1-202ENST00000358966 SNAP25P60880 206 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 CCDC96Q2M329 555 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 LONRF3Q496Y0 759 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 CCDC84Q86UT8 332 aaPredicted RBP14.43□□□□□ -0.1
GGPS1-202ENST00000358966 KRI1Q8N9T8 703 aaKnown RBP14.43□□□□□ -0.1
GGPS1-202ENST00000358966 EPSTI1Q96J88 318 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 GMLQ99445 158 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 CSRNP2Q9H175 543 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 KIF13BQ9NQT8 1826 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 TRIM75PA6NK02 468 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 CDC25AP30304 524 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 FKBP1AP62942 108 aaKnown RBP14.43□□□□□ -0.1
GGPS1-202ENST00000358966 FAM193AP78312 1265 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 PNOCQ13519 176 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 TAOK3Q9H2K8 898 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 NAPAP54920 295 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 DLGAP5Q15398 846 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 INF2Q27J81 1249 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 RESP18Q5W5W9 173 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 BLIDQ8IZY5 108 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 OGFOD1Q8N543 542 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 BRMS1Q9HCU9 246 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.43□□□□□ -0.1
GGPS1-202ENST00000358966 SWAP70Q9UH65 585 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 ZNRF3Q9ULT6 936 aa14.43□□□□□ -0.1
GGPS1-202ENST00000358966 PLIN4Q96Q06 1357 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 ASTN2O75129 1339 aaPredicted RBP14.42□□□□□ -0.1
GGPS1-202ENST00000358966 A0A087X0B3 334 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 TULP2O00295 520 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 GH2P01242 217 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 GTF2F1P35269 517 aaKnown RBP eCLIP14.42□□□□□ -0.12e-6■■■■□ 26
GGPS1-202ENST00000358966 HDLBPQ00341 1268 aaKnown RBP14.42□□□□□ -0.1
GGPS1-202ENST00000358966 PTGDRQ13258 359 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 DPCR1Q3MIW9 517 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 CCDC178Q5BJE1 867 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 TTC38Q5R3I4 469 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 SIAH1Q8IUQ4 282 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 SPICE1Q8N0Z3 855 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 GEMIN8Q9NWZ8 242 aaKnown RBP14.42□□□□□ -0.1
GGPS1-202ENST00000358966 BARHL2Q9NY43 387 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 VWA3AA6NCI4 1184 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 PTPREP23469 700 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 NOVP48745 357 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 ZNF165P49910 485 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 JMYQ8N9B5 988 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 FAM200AQ8TCP9 573 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 TMEM260Q9NX78 707 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 ZNF70Q9UC06 446 aaPredicted RBP14.42□□□□□ -0.1
GGPS1-202ENST00000358966 KCNH3Q9ULD8 1083 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 HPSEQ9Y251 543 aa14.42□□□□□ -0.1
GGPS1-202ENST00000358966 PSME4Q14997 1843 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 TULP1O00294 542 aaPredicted RBP14.41□□□□□ -0.1
GGPS1-202ENST00000358966 POLR2DO15514 142 aaKnown RBP14.41□□□□□ -0.1
GGPS1-202ENST00000358966 ADCY5O95622 1261 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 CASP1P29466 404 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 GNAQP50148 359 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 PCDHA4Q9UN74 947 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 PPP1R11O60927 126 aaPredicted RBP14.41□□□□□ -0.1
GGPS1-202ENST00000358966 TGFB2P61812 414 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 PRIMPOLQ96LW4 560 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 SGIP1Q9BQI5 828 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 MRIQ9BWK5 157 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 SPZ1Q9BXG8 430 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 EHD4Q9H223 541 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 DHX36Q9H2U1 1008 aaKnown RBP14.41□□□□□ -0.1
GGPS1-202ENST00000358966 PCDHA6Q9UN73 950 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 PCDHA8Q9Y5H6 950 aa14.41□□□□□ -0.1
GGPS1-202ENST00000358966 BRCA1P38398 1863 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms