RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 SAMD1Q6SPF0 538 aaPredicted RBP9.31□□□□□ -0.92
CD46-205ENST00000358170 TEX11Q8IYF3 940 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
CD46-205ENST00000358170 CTAGE1Q96RT6 745 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 TMEM47Q9BQJ4 181 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 ANKRD2Q9GZV1 360 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.31□□□□□ -0.92
CD46-205ENST00000358170 COL4A1P02462 1669 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 EFCAB8A8MWE9 144 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 B4DLN1 442 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 CYTH3O43739 400 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 GTPBP6O43824 516 aaPredicted RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 H2AFXP16104 143 aaPredicted RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 TRIM21P19474 475 aaKnown RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 MTIF2P46199 727 aaKnown RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 MRPS25P82663 173 aaKnown RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 PDE4DQ08499 809 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 RAD51AP2Q09MP3 1159 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 TERF2Q15554 542 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 FAM196AQ6ZSG2 479 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 RPGRQ92834 1020 aaKnown RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 NYXQ9GZU5 481 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 ARFGAP3Q9NP61 516 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 TMEM260Q9NX78 707 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 HDAC6Q9UBN7 1215 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 PCDHA4Q9UN74 947 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 FHOD1Q9Y613 1164 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 MYH15Q9Y2K3 1946 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 SMCO2A6NFE2 343 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 PARP1P09874 1014 aaKnown RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 BTDP43251 543 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 ERVK-24P63145 666 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 CYP27A1Q02318 531 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 TCP11X2Q5H9J9 407 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 FKBP15Q5T1M5 1219 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 C12orf60Q5U649 245 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 NCAPH2Q6IBW4 605 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 CNGA4Q8IV77 575 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 CSGALNACT2Q8N6G5 542 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 TNFRSF25Q93038 417 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 COA7Q96BR5 231 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 PSMB7Q99436 277 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 EYA3Q99504 573 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 ZHX3Q9H4I2 956 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 SLC39A2Q9NP94 309 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 TCP11L1Q9NUJ3 509 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 ZNF219Q9P2Y4 722 aaPredicted RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 GOLGA6L9A6NEM1 432 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 MPHOSPH10O00566 681 aaKnown RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 SRGAP2O75044 1071 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 ZMYND10O75800 440 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 FCER1AP12319 257 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 MAP3K9P80192 1104 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 SPTY2D1Q68D10 685 aaPredicted RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 PDXDC2PQ6P474 469 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 APTXQ7Z2E3 356 aaKnown RBP9.3□□□□□ -0.92
CD46-205ENST00000358170 KIAA1328Q86T90 577 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 CNBD1Q8NA66 436 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 GOLGA1Q92805 767 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 PIGSQ96S52 555 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 NARFQ9UHQ1 456 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 EP400Q96L91 3159 aa9.3□□□□□ -0.92
CD46-205ENST00000358170 TTC26A0AVF1 554 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 MACROD2A1Z1Q3 448 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 CTAGE9A4FU28 777 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 ORC4O43929 436 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 PLCG1P19174 1290 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 PLA2G4AP47712 749 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 TXNRD1Q16881 649 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 MFSD14BQ5SR56 506 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 SH3RF1Q7Z6J0 888 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 NEK11Q8NG66 645 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 SPATA20Q8TB22 786 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 DISC1Q9NRI5 854 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 SEC63Q9UGP8 760 aaKnown RBP9.29□□□□□ -0.92
CD46-205ENST00000358170 PCDHA6Q9UN73 950 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 LUC7L2Q9Y383 392 aaKnown RBP9.29□□□□□ -0.92
CD46-205ENST00000358170 PCDHA8Q9Y5H6 950 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 MRFAP1Q9Y605 127 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 ITGB4P16144 1822 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 DISP2A7MBM2 1401 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 SPATA31A5Q5VU36 1347 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 SPATA31A7Q8IWB4 1347 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 C4AP0C0L4 1744 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 C4BP0C0L5 1744 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 SASH3O75995 380 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 TBC1D8BQ0IIM8 1120 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 STIM1Q13586 685 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 SLC35G1Q2M3R5 365 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 TRAPPC3LQ5T215 181 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 ZNF658Q5TYW1 1059 aaPredicted RBP9.29□□□□□ -0.92
CD46-205ENST00000358170 CABP7Q86V35 215 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 MXD3Q9BW11 206 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 TANGO6Q9C0B7 1094 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 TBC1D7Q9P0N9 293 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 LRP6O75581 1613 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 MYH14Q7Z406 1995 aaKnown RBP9.29□□□□□ -0.92
CD46-205ENST00000358170 PSMA7O14818 248 aa9.29□□□□□ -0.92
CD46-205ENST00000358170 MATR3P43243 847 aaKnown RBP eCLIP9.29□□□□□ -0.925e-7■■■■■ 27
CD46-205ENST00000358170 KCNJ6P48051 423 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms