RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 COG2Q14746 738 aa17.31■□□□□ 0.36
CCNE1-202ENST00000357943 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
CCNE1-202ENST00000357943 BTNL9Q6UXG8 535 aa17.31■□□□□ 0.36
CCNE1-202ENST00000357943 CCDC82Q8N4S0 544 aa17.31■□□□□ 0.36
CCNE1-202ENST00000357943 P2RX7Q99572 595 aaKnown RBP17.31■□□□□ 0.36
CCNE1-202ENST00000357943 CYTH3O43739 400 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 PLA2G6O60733 806 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 OSBPP22059 807 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 MCM2P49736 904 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 ST3GAL1Q11201 340 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 TMTC3Q6ZXV5 915 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 REM2Q8IYK8 340 aaPredicted RBP17.3■□□□□ 0.36
CCNE1-202ENST00000357943 SRBD1Q8N5C6 995 aaKnown RBP17.3■□□□□ 0.36
CCNE1-202ENST00000357943 PRPF38AQ8NAV1 312 aaKnown RBP17.3■□□□□ 0.36
CCNE1-202ENST00000357943 CHURC1Q8WUH1 139 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 RBM28Q9NW13 759 aaKnown RBP17.3■□□□□ 0.36
CCNE1-202ENST00000357943 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
CCNE1-202ENST00000357943 SPDYE16A6NNV3 312 aaPredicted RBP17.29■□□□□ 0.36
CCNE1-202ENST00000357943 DSG3P32926 999 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 HERVK_113P62684 666 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 PPP2R5BQ15173 497 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 SYDE2Q5VT97 1194 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 OTUD7BQ6GQQ9 843 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 POTEEQ6S8J3 1075 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 FAM160B2Q86V87 743 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 GTF3C6Q969F1 213 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 TMX3Q96JJ7 454 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 ZCCHC17Q9NP64 241 aaKnown RBP17.29■□□□□ 0.36
CCNE1-202ENST00000357943 HOXC10Q9NYD6 342 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 PNMA3Q9UL41 463 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 PRR12Q9ULL5 1215 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 CCDC196A0A1B0GTZ2 297 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 DTNBO60941 627 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 PPFIA3O75145 1194 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 GNAQP50148 359 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 NTRK3Q16288 839 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 ADGRF4Q8IZF3 695 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 SNX21Q969T3 373 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 ZSCAN31Q96LW9 406 aaPredicted RBP17.29■□□□□ 0.36
CCNE1-202ENST00000357943 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
CCNE1-202ENST00000357943 THSD7BQ9C0I4 1608 aa17.28■□□□□ 0.36
CCNE1-202ENST00000357943 PEX10O60683 326 aa17.28■□□□□ 0.36
CCNE1-202ENST00000357943 SNAP25P60880 206 aa17.28■□□□□ 0.36
CCNE1-202ENST00000357943 FUT2Q10981 343 aa17.28■□□□□ 0.36
CCNE1-202ENST00000357943 TAF1CQ15572 869 aaPredicted RBP17.28■□□□□ 0.36
CCNE1-202ENST00000357943 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
CCNE1-202ENST00000357943 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
CCNE1-202ENST00000357943 PARK7Q99497 189 aaKnown RBP17.28■□□□□ 0.36
CCNE1-202ENST00000357943 RIOX1Q9H6W3 641 aa17.28■□□□□ 0.36
CCNE1-202ENST00000357943 JMJD4Q9H9V9 463 aa17.28■□□□□ 0.36
CCNE1-202ENST00000357943 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
CCNE1-202ENST00000357943 ADAMTS5Q9UNA0 930 aa17.28■□□□□ 0.36
CCNE1-202ENST00000357943 VWA5AO00534 786 aa17.27■□□□□ 0.36
CCNE1-202ENST00000357943 DHX16O60231 1041 aaKnown RBP17.27■□□□□ 0.36
CCNE1-202ENST00000357943 PIBF1Q8WXW3 757 aa17.27■□□□□ 0.36
CCNE1-202ENST00000357943 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
CCNE1-202ENST00000357943 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
CCNE1-202ENST00000357943 RLFQ13129 1914 aa17.27■□□□□ 0.36
CCNE1-202ENST00000357943 MYPNQ86TC9 1320 aa17.27■□□□□ 0.35
CCNE1-202ENST00000357943 CPLX1O14810 134 aa17.26■□□□□ 0.35
CCNE1-202ENST00000357943 CRHR2Q13324 411 aa17.26■□□□□ 0.35
CCNE1-202ENST00000357943 LBX2Q6XYB7 198 aa17.26■□□□□ 0.35
CCNE1-202ENST00000357943 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
CCNE1-202ENST00000357943 PHKBQ93100 1093 aa17.26■□□□□ 0.35
CCNE1-202ENST00000357943 SLC38A10Q9HBR0 1119 aa17.26■□□□□ 0.35
CCNE1-202ENST00000357943 CNTNAP5Q8WYK1 1306 aa17.26■□□□□ 0.35
CCNE1-202ENST00000357943 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 CA12O43570 354 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 CTDNEP1O95476 244 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 ALDH1A1P00352 501 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 IFNAR1P17181 557 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 SMARCA1P28370 1054 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 REPS2Q8NFH8 660 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 PIGSQ96S52 555 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
CCNE1-202ENST00000357943 R3HDMLQ9H3Y0 253 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 TXNRD2Q9NNW7 524 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 RNF186Q9NXI6 227 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
CCNE1-202ENST00000357943 TRPA1O75762 1119 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 TMEM132BQ14DG7 1078 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
CCNE1-202ENST00000357943 CCDC174Q6PII3 467 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 HSCBQ8IWL3 235 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 MTMR8Q96EF0 704 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 PAGR1Q9BTK6 254 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 ZFYVE28Q9HCC9 887 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 BTBD7Q9P203 1132 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 RBPJLQ9UBG7 517 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 PARP14Q460N5 1801 aa17.25■□□□□ 0.35
CCNE1-202ENST00000357943 TLR2O60603 784 aa17.24■□□□□ 0.35
CCNE1-202ENST00000357943 CNMDO75829 334 aa17.24■□□□□ 0.35
CCNE1-202ENST00000357943 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
CCNE1-202ENST00000357943 CPA4Q9UI42 421 aa17.24■□□□□ 0.35
CCNE1-202ENST00000357943 ZNF214Q9UL59 606 aaPredicted RBP17.24■□□□□ 0.35
CCNE1-202ENST00000357943 V9GY48 417 aaPredicted RBP17.24■□□□□ 0.35
CCNE1-202ENST00000357943 ZNF536O15090 1300 aa17.24■□□□□ 0.35
CCNE1-202ENST00000357943 ADGRA2Q96PE1 1338 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms