RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 H2AFVQ71UI9 128 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 FAM212AQ96EL1 285 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 UIMC1Q96RL1 719 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 MRPL44Q9H9J2 332 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 FEZ2Q9UHY8 353 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 CIAO1O76071 339 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 CASP8Q14790 479 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 CCDC144BQ3MJ40 725 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 MAPKAPK5Q8IW41 473 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 EFCAB13Q8IY85 973 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 BIN2Q9UBW5 565 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 RIMBP2O15034 1052 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 GAS8O95995 478 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 POLR2FP61218 127 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 HHATQ5VTY9 493 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 MYCT1Q8N699 235 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 RETREG2Q8NC44 543 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 CNOT6LQ96LI5 555 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 STK24Q9Y6E0 443 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 A0A087WUV0 522 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 TRAPPC10P48553 1259 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 EHHADHQ08426 723 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 NR5A1Q13285 461 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 PANX2Q96RD6 677 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 B4DLN1 442 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 ARHGAP44Q17R89 818 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 TTC19Q6DKK2 380 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 ARHGEF2Q92974 986 aaKnown RBP17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 MCUR1Q96AQ8 359 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 M0R2C6 588 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 KRT15P19012 456 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 ABCB4P21439 1286 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 EPHB4P54760 987 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 NEK8Q86SG6 692 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 DPH5Q9H2P9 285 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 PKD2L1Q9P0L9 805 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 CIB2O75838 187 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 SLC1A4P43007 532 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 ZNF131P52739 623 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 SMTNP53814 917 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 LIN9Q5TKA1 542 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 AIFM3Q96NN9 605 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 OSBPL5Q9H0X9 879 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 ADAM21Q9UKJ8 722 aa17.21■□□□□ 0.35
TRAPPC11-202ENST00000357207 BCAMP50895 628 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 GALNT17Q6IS24 598 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 MYCBPQ99417 103 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 ABCB6Q9NP58 842 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 COMMD10Q9Y6G5 202 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 CDK12Q9NYV4 1490 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 DDAH1O94760 285 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 MMP1P03956 469 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 STX2P32856 288 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 KMT5BQ4FZB7 885 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 CCDC110Q8TBZ0 833 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 CPSF2Q9P2I0 782 aaKnown RBP17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 SAMD9LQ8IVG5 1584 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 CCDC169A6NNP5 214 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 UFL1O94874 794 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 PTPROQ16827 1216 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 ANKRD42Q8N9B4 389 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 MGARPQ8TDB4 240 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 MICAL1Q8TDZ2 1067 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 GPKOWQ92917 476 aaPredicted RBP eCLIP17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 PCDHA12Q9UN75 941 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 KLRF2D3W0D1 207 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 RASSF7Q02833 373 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 CCDC38Q502W7 563 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 FAM26FQ5R3K3 315 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 DPH6Q7L8W6 267 aa17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 DHTKD1Q96HY7 919 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC11-202ENST00000357207 LTKP29376 864 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 GPBP1Q86WP2 473 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 AGTPBP1Q9UPW5 1226 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 KDM3AQ9Y4C1 1321 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 PRAMEF22A3QJZ6 481 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 BACH1O14867 736 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 BTG4Q9NY30 223 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 FAM184BQ9ULE4 1060 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 NDUFA10O95299 355 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 KRT12Q99456 494 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 MAGEF1Q9HAY2 307 aa17.19■□□□□ 0.34
TRAPPC11-202ENST00000357207 IFT88Q13099 833 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 EYA3Q99504 573 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 TACO1Q9BSH4 297 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 CUEDC2Q9H467 287 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 SH2B2O14492 632 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 PCP11498 1178 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 GYG1P46976 350 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 CFAP157Q5JU67 520 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 CCDC170Q8IYT3 715 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 MAIP1Q8WWC4 291 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 GREM2Q9H772 168 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms