RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 A0A1W2PQ64 194 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 A0A1W2PQD8 194 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 NLRP5P59047 1200 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 ZNF543Q08ER8 600 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 ENGASEQ8NFI3 743 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
ABCD4-201ENST00000356924 TMEM39BQ9GZU3 492 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.72□□□□□ -0.373e-6■■■■□ 20.7
ABCD4-201ENST00000356924 CABP5Q9NP86 173 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 PPP6R2O75170 966 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 SNW1Q13573 536 aaKnown RBP12.72□□□□□ -0.37
ABCD4-201ENST00000356924 RILPL1Q5EBL4 403 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 C17orf53Q8N3J3 647 aaPredicted RBP12.72□□□□□ -0.37
ABCD4-201ENST00000356924 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 DPF2Q92785 391 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 CLSTN2Q9H4D0 955 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
ABCD4-201ENST00000356924 BARHL2Q9NY43 387 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 MARCKSP29966 332 aaPredicted RBP12.72□□□□□ -0.37
ABCD4-201ENST00000356924 ATP2B2Q01814 1243 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 FSIP1Q8NA03 581 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 FUCA2Q9BTY2 467 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 PCDHB6Q9Y5E3 794 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
ABCD4-201ENST00000356924 M0R2N6 131 aa12.71□□□□□ -0.37
ABCD4-201ENST00000356924 MYO1BO43795 1136 aa12.71□□□□□ -0.37
ABCD4-201ENST00000356924 TBC1D12O60347 775 aa12.71□□□□□ -0.37
ABCD4-201ENST00000356924 GH2P01242 217 aa12.71□□□□□ -0.37
ABCD4-201ENST00000356924 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.37
ABCD4-201ENST00000356924 TTBK2Q6IQ55 1244 aa12.71□□□□□ -0.37
ABCD4-201ENST00000356924 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.37
ABCD4-201ENST00000356924 PIGSQ96S52 555 aa12.71□□□□□ -0.37
ABCD4-201ENST00000356924 NUP62CLQ9H1M0 184 aa12.71□□□□□ -0.37
ABCD4-201ENST00000356924 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.37
ABCD4-201ENST00000356924 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.71□□□□□ -0.37
ABCD4-201ENST00000356924 WNT7AO00755 349 aa12.71□□□□□ -0.38
ABCD4-201ENST00000356924 ICA1Q05084 483 aa12.71□□□□□ -0.38
ABCD4-201ENST00000356924 DAGLBQ8NCG7 672 aa12.71□□□□□ -0.38
ABCD4-201ENST00000356924 RRP36Q96EU6 259 aaKnown RBP12.71□□□□□ -0.38
ABCD4-201ENST00000356924 VAT1LQ9HCJ6 419 aa12.71□□□□□ -0.38
ABCD4-201ENST00000356924 CNOT7Q9UIV1 285 aaKnown RBP12.71□□□□□ -0.38
ABCD4-201ENST00000356924 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.38
ABCD4-201ENST00000356924 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 RBM43Q6ZSC3 357 aaKnown RBP12.7□□□□□ -0.38
ABCD4-201ENST00000356924 SAMD7Q7Z3H4 446 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 BLIDQ8IZY5 108 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
ABCD4-201ENST00000356924 TSPY26PQ9H489 355 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 TMEM51Q9NW97 253 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 CALML3P27482 149 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 ARHGAP27Q6ZUM4 889 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 FMR1NBQ8N0W7 255 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-201ENST00000356924 FAM177A1Q8N128 213 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-201ENST00000356924 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
ABCD4-201ENST00000356924 ASTN2O75129 1339 aaPredicted RBP12.7□□□□□ -0.38
ABCD4-201ENST00000356924 FAM160A1Q05DH4 1040 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 CAMK4Q16566 473 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 DCAF4Q8WV16 495 aa12.7□□□□□ -0.38
ABCD4-201ENST00000356924 ATAD5Q96QE3 1844 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 A0A1B0GVL5 298 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 CMA1P23946 247 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 NDUFA8P51970 172 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 GPATCH4Q5T3I0 446 aaKnown RBP12.69□□□□□ -0.38
ABCD4-201ENST00000356924 SLFN13Q68D06 897 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 CCDC73Q6ZRK6 1079 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 ADGRF4Q8IZF3 695 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 TEPSINQ96N21 525 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 JMJD4Q9H9V9 463 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 FBXO2Q9UK22 296 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-201ENST00000356924 MORC2Q9Y6X9 1032 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-201ENST00000356924 A0A1W2PRG0 241 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 CUTAO60888 179 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 RASA3Q14644 834 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 TBC1D10BQ4KMP7 808 aaPredicted RBP12.69□□□□□ -0.38
ABCD4-201ENST00000356924 SHC4Q6S5L8 630 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 GMCL1P1Q8NEA9 526 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 MTMR8Q96EF0 704 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 CLIC6Q96NY7 704 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 ZMYND12Q9H0C1 365 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 TNMDQ9H2S6 317 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 PCDHA6Q9UN73 950 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 PCDHA8Q9Y5H6 950 aa12.69□□□□□ -0.38
ABCD4-201ENST00000356924 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 MAP3K11Q16584 847 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 GALNT17Q6IS24 598 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 PIK3AP1Q6ZUJ8 805 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 ZNF771Q7L3S4 317 aaPredicted RBP12.68□□□□□ -0.38
ABCD4-201ENST00000356924 MIGA2Q7L4E1 593 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 RASGRP4Q8TDF6 673 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 SEC63Q9UGP8 760 aaKnown RBP12.68□□□□□ -0.38
ABCD4-201ENST00000356924 FAM237AA0A1B0GTK4 181 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms