RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 RRP36Q96EU6 259 aaKnown RBP20.52■□□□□ 0.88
APP-203ENST00000354192 PCDHA6Q9UN73 950 aa20.52■□□□□ 0.88
APP-203ENST00000354192 PCDHA8Q9Y5H6 950 aa20.52■□□□□ 0.88
APP-203ENST00000354192 AKR1B1P15121 316 aa20.52■□□□□ 0.87
APP-203ENST00000354192 ATP2B4P23634 1241 aa20.52■□□□□ 0.87
APP-203ENST00000354192 RAD51AP2Q09MP3 1159 aa20.52■□□□□ 0.87
APP-203ENST00000354192 MTRQ99707 1265 aa20.52■□□□□ 0.87
APP-203ENST00000354192 PCP11498 1178 aaKnown RBP20.51■□□□□ 0.87
APP-203ENST00000354192 PRKCSHP14314 528 aaPredicted RBP20.51■□□□□ 0.87
APP-203ENST00000354192 RCAN1P53805 252 aa20.51■□□□□ 0.87
APP-203ENST00000354192 UBE2SQ16763 222 aa20.51■□□□□ 0.87
APP-203ENST00000354192 TTBK2Q6IQ55 1244 aa20.51■□□□□ 0.87
APP-203ENST00000354192 PPP2R2CQ9Y2T4 447 aa20.51■□□□□ 0.87
APP-203ENST00000354192 MYH15Q9Y2K3 1946 aa20.51■□□□□ 0.87
APP-203ENST00000354192 PPEF1O14829 653 aaPredicted RBP20.51■□□□□ 0.87
APP-203ENST00000354192 TRIM47Q96LD4 638 aa20.51■□□□□ 0.87
APP-203ENST00000354192 ZNF287Q9HBT7 754 aa20.51■□□□□ 0.87
APP-203ENST00000354192 DAGLAQ9Y4D2 1042 aa20.51■□□□□ 0.87
APP-203ENST00000354192 CHD4Q14839 1912 aa20.51■□□□□ 0.87
APP-203ENST00000354192 BMP15O95972 392 aa20.5■□□□□ 0.87
APP-203ENST00000354192 SARSP49591 514 aaKnown RBP20.5■□□□□ 0.87
APP-203ENST00000354192 ASIC1P78348 528 aa20.5■□□□□ 0.87
APP-203ENST00000354192 TBCKQ8TEA7 893 aa20.5■□□□□ 0.87
APP-203ENST00000354192 TNFRSF25Q93038 417 aa20.5■□□□□ 0.87
APP-203ENST00000354192 FAM237AA0A1B0GTK4 181 aa20.5■□□□□ 0.87
APP-203ENST00000354192 SLU7O95391 586 aaKnown RBP20.5■□□□□ 0.87
APP-203ENST00000354192 RPN1P04843 607 aaKnown RBP20.5■□□□□ 0.87
APP-203ENST00000354192 GNAQP50148 359 aa20.5■□□□□ 0.87
APP-203ENST00000354192 SPATA1Q5VX52 437 aa20.5■□□□□ 0.87
APP-203ENST00000354192 CARD6Q9BX69 1037 aa20.5■□□□□ 0.87
APP-203ENST00000354192 TCP11L1Q9NUJ3 509 aa20.5■□□□□ 0.87
APP-203ENST00000354192 TRPC5Q9UL62 973 aaPredicted RBP20.5■□□□□ 0.87
APP-203ENST00000354192 GRM4Q14833 912 aa20.5■□□□□ 0.87
APP-203ENST00000354192 CCDC148Q8NFR7 591 aa20.5■□□□□ 0.87
APP-203ENST00000354192 ZHX3Q9H4I2 956 aa20.5■□□□□ 0.87
APP-203ENST00000354192 FGRP09769 529 aa20.49■□□□□ 0.87
APP-203ENST00000354192 PRCPP42785 496 aa20.49■□□□□ 0.87
APP-203ENST00000354192 TXNRD1Q16881 649 aa20.49■□□□□ 0.87
APP-203ENST00000354192 CACNA1SQ13698 1873 aa20.49■□□□□ 0.87
APP-203ENST00000354192 UBXN1Q04323 297 aa20.49■□□□□ 0.87
APP-203ENST00000354192 NFIAQ12857 509 aa20.49■□□□□ 0.87
APP-203ENST00000354192 PAK1Q13153 545 aa20.49■□□□□ 0.87
APP-203ENST00000354192 DDX4Q9NQI0 724 aaKnown RBP20.49■□□□□ 0.87
APP-203ENST00000354192 AKR1B15C9JRZ8 316 aaPredicted RBP20.48■□□□□ 0.87
APP-203ENST00000354192 APBA3O96018 575 aa20.48■□□□□ 0.87
APP-203ENST00000354192 TAL1P17542 331 aaPredicted RBP20.48■□□□□ 0.87
APP-203ENST00000354192 GTF2F1P35269 517 aaKnown RBP eCLIP20.48■□□□□ 0.87
APP-203ENST00000354192 KRT27Q7Z3Y8 459 aa20.48■□□□□ 0.87
APP-203ENST00000354192 TC2NQ8N9U0 490 aa20.48■□□□□ 0.87
APP-203ENST00000354192 CCDC12Q8WUD4 166 aaPredicted RBP20.48■□□□□ 0.87
APP-203ENST00000354192 LRP5O75197 1615 aa20.48■□□□□ 0.87
APP-203ENST00000354192 LTBP4Q8N2S1 1624 aa20.48■□□□□ 0.87
APP-203ENST00000354192 MMP10P09238 476 aa20.48■□□□□ 0.87
APP-203ENST00000354192 TEX35Q5T0J7 233 aa20.48■□□□□ 0.87
APP-203ENST00000354192 ANKRD20A12PQ8NF67 263 aa20.48■□□□□ 0.87
APP-203ENST00000354192 CDK5RAP3Q96JB5 506 aa20.48■□□□□ 0.87
APP-203ENST00000354192 WDR24Q96S15 920 aa20.48■□□□□ 0.87
APP-203ENST00000354192 CCDC94Q9BW85 323 aaPredicted RBP20.48■□□□□ 0.87
APP-203ENST00000354192 TRIM34Q9BYJ4 488 aa20.48■□□□□ 0.87
APP-203ENST00000354192 MKRN1Q9UHC7 482 aaKnown RBP20.48■□□□□ 0.87
APP-203ENST00000354192 PPP1R3GB7ZBB8 358 aa20.48■□□□□ 0.87
APP-203ENST00000354192 STXBP3O00186 592 aa20.48■□□□□ 0.87
APP-203ENST00000354192 TPM1P09493 284 aa20.48■□□□□ 0.87
APP-203ENST00000354192 ETF1P62495 437 aaKnown RBP20.48■□□□□ 0.87
APP-203ENST00000354192 GSDMAQ96QA5 445 aa20.48■□□□□ 0.87
APP-203ENST00000354192 SRRTQ9BXP5 876 aaKnown RBP20.48■□□□□ 0.87
APP-203ENST00000354192 C6orf50Q9HD87 102 aa20.48■□□□□ 0.87
APP-203ENST00000354192 MYH6P13533 1939 aa20.48■□□□□ 0.87
APP-203ENST00000354192 PLCG1P19174 1290 aa20.47■□□□□ 0.87
APP-203ENST00000354192 POTEDQ86YR6 584 aa20.47■□□□□ 0.87
APP-203ENST00000354192 BARHL2Q9NY43 387 aa20.47■□□□□ 0.87
APP-203ENST00000354192 NONOQ15233 471 aaKnown RBP eCLIP20.47■□□□□ 0.87
APP-203ENST00000354192 KRT31Q15323 416 aa20.47■□□□□ 0.87
APP-203ENST00000354192 MTERF4Q7Z6M4 381 aaKnown RBP20.47■□□□□ 0.87
APP-203ENST00000354192 CABP7Q86V35 215 aa20.47■□□□□ 0.87
APP-203ENST00000354192 ZSCAN12O43309 604 aa20.46■□□□□ 0.87
APP-203ENST00000354192 BBOX1O75936 387 aa20.46■□□□□ 0.87
APP-203ENST00000354192 ARHGAP29Q52LW3 1261 aa20.46■□□□□ 0.87
APP-203ENST00000354192 ZFPM1Q8IX07 1006 aa20.46■□□□□ 0.87
APP-203ENST00000354192 REXO1Q8N1G1 1221 aaKnown RBP20.46■□□□□ 0.87
APP-203ENST00000354192 ACRBPQ8NEB7 543 aa20.46■□□□□ 0.87
APP-203ENST00000354192 POLD4Q9HCU8 107 aa20.46■□□□□ 0.87
APP-203ENST00000354192 DISC1Q9NRI5 854 aa20.46■□□□□ 0.87
APP-203ENST00000354192 TBC1D7Q9P0N9 293 aa20.46■□□□□ 0.87
APP-203ENST00000354192 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
APP-203ENST00000354192 POTEMA6NI47 508 aa20.46■□□□□ 0.87
APP-203ENST00000354192 ARHGAP6O43182 974 aa20.46■□□□□ 0.87
APP-203ENST00000354192 TFRCP02786 760 aaKnown RBP20.46■□□□□ 0.87
APP-203ENST00000354192 ZNF18P17022 549 aa20.46■□□□□ 0.87
APP-203ENST00000354192 PDE4DQ08499 809 aa20.46■□□□□ 0.87
APP-203ENST00000354192 CERS5Q8N5B7 392 aa20.46■□□□□ 0.87
APP-203ENST00000354192 RNF216Q9NWF9 866 aaPredicted RBP20.46■□□□□ 0.87
APP-203ENST00000354192 TFR2Q9UP52 801 aa20.46■□□□□ 0.87
APP-203ENST00000354192 CASQ1P31415 396 aa20.46■□□□□ 0.87
APP-203ENST00000354192 FXR1P51114 621 aaKnown RBP eCLIP20.46■□□□□ 0.87
APP-203ENST00000354192 PMS1P54277 932 aaKnown RBP20.46■□□□□ 0.87
APP-203ENST00000354192 RHBDL3P58872 404 aa20.46■□□□□ 0.87
APP-203ENST00000354192 TRIML1Q8N9V2 468 aa20.46■□□□□ 0.87
APP-203ENST00000354192 UBXN4Q92575 508 aa20.46■□□□□ 0.87
APP-203ENST00000354192 SLC39A2Q9NP94 309 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms