RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ASTN2O75129 1339 aaPredicted RBP9.81□□□□□ -0.84
TRIM55-204ENST00000353317 MYH4Q9Y623 1939 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 TCP10L2B9ZVM9 353 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 IKBKBO14920 756 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 H2AFXP16104 143 aaPredicted RBP9.81□□□□□ -0.84
TRIM55-204ENST00000353317 SOGA3Q5TF21 947 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 NEDD1Q8NHV4 660 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 SPON1Q9HCB6 807 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 ST7Q9NRC1 585 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 SERPINB13Q9UIV8 391 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 TUBE1Q9UJT0 475 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 MTMR7Q9Y216 660 aa9.81□□□□□ -0.84
TRIM55-204ENST00000353317 POLR2AP24928 1970 aaKnown RBP9.8□□□□□ -0.84
TRIM55-204ENST00000353317 FANCGO15287 622 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 SYKP43405 635 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 EIF6P56537 245 aaKnown RBP9.8□□□□□ -0.84
TRIM55-204ENST00000353317 SHC4Q6S5L8 630 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 ANKS1AQ92625 1134 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 VPS33BQ9H267 617 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 STX8Q9UNK0 236 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 HPSEQ9Y251 543 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 CNTNAP1P78357 1384 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 FMNL1O95466 1100 aaPredicted RBP9.8□□□□□ -0.84
TRIM55-204ENST00000353317 UBASH3AP57075 661 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 ETF1P62495 437 aaKnown RBP9.8□□□□□ -0.84
TRIM55-204ENST00000353317 PNOCQ13519 176 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 PTPN21Q16825 1174 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 DGKHQ86XP1 1220 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 HOMER1Q86YM7 354 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 PNMA1Q8ND90 353 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 ZBED3Q96IU2 234 aaPredicted RBP9.8□□□□□ -0.84
TRIM55-204ENST00000353317 TIGD1Q96MW7 591 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 ALG1Q9BT22 464 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 TCP11L1Q9NUJ3 509 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 ZNF70Q9UC06 446 aaPredicted RBP9.8□□□□□ -0.84
TRIM55-204ENST00000353317 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.8□□□□□ -0.84
TRIM55-204ENST00000353317 ZNF541Q9H0D2 1346 aa9.8□□□□□ -0.84
TRIM55-204ENST00000353317 IGKV6D-41A0A0C4DH26 115 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 FZD9O00144 591 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 WNT10BO00744 389 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 NRDCO43847 1150 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 GOLGA8HP0CJ92 632 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 NOVP48745 357 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 PTPAQ15257 358 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 KRT40Q6A162 431 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 CIAPIN1Q6FI81 312 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 TRIM65Q6PJ69 517 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 CATIPQ7Z7H3 387 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 AMOTL1Q8IY63 956 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 DNAI1Q9UI46 699 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 MAD2L2Q9UI95 211 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 KCNJ14Q9UNX9 436 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 DICER1Q9UPY3 1922 aaKnown RBP9.79□□□□□ -0.84
TRIM55-204ENST00000353317 CYTH3O43739 400 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 SERPINC1P01008 464 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 CLCN6P51797 869 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 MYL5Q02045 173 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 GOLGA8FQ08AF8 430 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 GOLGA8DPQ0D2H9 430 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 TMTC3Q6ZXV5 915 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 SAMD7Q7Z3H4 446 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 SIAH1Q8IUQ4 282 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 FOXP4Q8IVH2 680 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-204ENST00000353317 JDP2Q8WYK2 163 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 CLIC6Q96NY7 704 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 MAP3K14Q99558 947 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 SYT17Q9BSW7 474 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 TMX1Q9H3N1 280 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 PGAP2Q9UHJ9 254 aa9.79□□□□□ -0.84
TRIM55-204ENST00000353317 V9GY48 417 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-204ENST00000353317 CNTNAP5Q8WYK1 1306 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 LTBP3Q9NS15 1303 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 PPP6R2O75170 966 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 YBX3P16989 372 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRIM55-204ENST00000353317 SSRP1Q08945 709 aaKnown RBP9.78□□□□□ -0.84
TRIM55-204ENST00000353317 DHX8Q14562 1220 aaKnown RBP9.78□□□□□ -0.84
TRIM55-204ENST00000353317 DLGAP5Q15398 846 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 ARHGAP29Q52LW3 1261 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 RBM26Q5T8P6 1007 aaKnown RBP9.78□□□□□ -0.84
TRIM55-204ENST00000353317 ZSCAN29Q8IWY8 852 aaPredicted RBP9.78□□□□□ -0.84
TRIM55-204ENST00000353317 AGBL3Q8NEM8 1001 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 TMEM39BQ9GZU3 492 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 MTMR4Q9NYA4 1195 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.78□□□□□ -0.84
TRIM55-204ENST00000353317 FHOD1Q9Y613 1164 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 SMCHD1A6NHR9 2005 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 PHLPP2Q6ZVD8 1323 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 MYO3BQ8WXR4 1341 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 TUBB4AP04350 444 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 RCAN1P53805 252 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 SPDYE2Q495Y8 402 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 LONRF3Q496Y0 759 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 NOM1Q5C9Z4 860 aaKnown RBP9.78□□□□□ -0.84
TRIM55-204ENST00000353317 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 METTL16Q86W50 562 aaKnown RBP9.78□□□□□ -0.84
TRIM55-204ENST00000353317 OXER1Q8TDS5 423 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 FANCLQ9NW38 375 aa9.78□□□□□ -0.84
TRIM55-204ENST00000353317 DDAH1O94760 285 aa9.77□□□□□ -0.85
TRIM55-204ENST00000353317 GDF11O95390 407 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms