RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RGS19P49795 217 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 SOX10P56693 466 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 PLS1Q14651 629 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 KCTD1Q719H9 257 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 CYB5R4Q7L1T6 521 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 CHURC1Q8WUH1 139 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 KIFC2Q96AC6 838 aa25.98■■□□□ 1.75
SNX3-202ENST00000349379 STAT3P40763 770 aa25.97■■□□□ 1.75
SNX3-202ENST00000349379 RGS2P41220 211 aa25.97■■□□□ 1.75
SNX3-202ENST00000349379 TRDNQ13061 729 aa25.97■■□□□ 1.75
SNX3-202ENST00000349379 MAP2K5Q13163 448 aa25.97■■□□□ 1.75
SNX3-202ENST00000349379 SEC23AQ15436 765 aa25.97■■□□□ 1.75
SNX3-202ENST00000349379 SLC27A2O14975 620 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 STRNO43815 780 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 HOXC6P09630 235 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 CYP2B6P20813 491 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 OAZ1P54368 228 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 WDR78Q5VTH9 848 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 BTNL9Q6UXG8 535 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 NCOA7Q8NI08 942 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 APBA2Q99767 749 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 TEX13BQ9BXU2 312 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 CWC22Q9HCG8 908 aaKnown RBP25.96■■□□□ 1.75
SNX3-202ENST00000349379 IVNS1ABPQ9Y6Y0 642 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 BRCA2P51587 3418 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 MYH6P13533 1939 aa25.96■■□□□ 1.75
SNX3-202ENST00000349379 ZBED4O75132 1171 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 COPB2P35606 906 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 MTFR1Q15390 333 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 CREB3L3Q68CJ9 461 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 NCAPG2Q86XI2 1143 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 MB21D2Q8IYB1 491 aaPredicted RBP25.95■■□□□ 1.74
SNX3-202ENST00000349379 ABRAQ8N0Z2 381 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 TRIB2Q92519 343 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 CHMP4CQ96CF2 233 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 UBAC1Q9BSL1 405 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 MTMR7Q9Y216 660 aa25.95■■□□□ 1.74
SNX3-202ENST00000349379 HMGCRP04035 888 aa25.94■■□□□ 1.74
SNX3-202ENST00000349379 INHAP05111 366 aa25.94■■□□□ 1.74
SNX3-202ENST00000349379 UBXN2AP68543 259 aa25.94■■□□□ 1.74
SNX3-202ENST00000349379 ZNF543Q08ER8 600 aa25.94■■□□□ 1.74
SNX3-202ENST00000349379 CCDC96Q2M329 555 aa25.94■■□□□ 1.74
SNX3-202ENST00000349379 RALYLQ86SE5 291 aaKnown RBP25.94■■□□□ 1.74
SNX3-202ENST00000349379 PNMA1Q8ND90 353 aa25.94■■□□□ 1.74
SNX3-202ENST00000349379 PRR12Q9ULL5 1215 aa25.94■■□□□ 1.74
SNX3-202ENST00000349379 POTEFA5A3E0 1075 aa25.93■■□□□ 1.74
SNX3-202ENST00000349379 SNRNP48Q6IEG0 339 aaKnown RBP25.93■■□□□ 1.74
SNX3-202ENST00000349379 TTBK2Q6IQ55 1244 aa25.93■■□□□ 1.74
SNX3-202ENST00000349379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.93■■□□□ 1.74
SNX3-202ENST00000349379 TRMT44Q8IYL2 757 aaKnown RBP25.93■■□□□ 1.74
SNX3-202ENST00000349379 KAT14Q9H8E8 782 aa25.93■■□□□ 1.74
SNX3-202ENST00000349379 ISY1Q9ULR0 285 aaKnown RBP25.93■■□□□ 1.74
SNX3-202ENST00000349379 RIPK3Q9Y572 518 aa25.93■■□□□ 1.74
SNX3-202ENST00000349379 ZNF536O15090 1300 aa25.92■■□□□ 1.74
SNX3-202ENST00000349379 IGHA2P01877 340 aa25.92■■□□□ 1.74
SNX3-202ENST00000349379 ADORA2AP29274 412 aa25.92■■□□□ 1.74
SNX3-202ENST00000349379 ANTXR2P58335 489 aa25.92■■□□□ 1.74
SNX3-202ENST00000349379 RAVER2Q9HCJ3 691 aaKnown RBP25.92■■□□□ 1.74
SNX3-202ENST00000349379 FRMPD2Q68DX3 1309 aaPredicted RBP25.91■■□□□ 1.74
SNX3-202ENST00000349379 FRMPD3Q5JV73 1810 aa25.91■■□□□ 1.74
SNX3-202ENST00000349379 IKQ13123 557 aaPredicted RBP25.91■■□□□ 1.74
SNX3-202ENST00000349379 CCL14Q16627 93 aa25.91■■□□□ 1.74
SNX3-202ENST00000349379 IFIT1BQ5T764 474 aaKnown RBP25.91■■□□□ 1.74
SNX3-202ENST00000349379 CPXCR1Q8N123 301 aa25.91■■□□□ 1.74
SNX3-202ENST00000349379 NPLOC4Q8TAT6 608 aa25.91■■□□□ 1.74
SNX3-202ENST00000349379 TMEM106CQ9BVX2 250 aa25.91■■□□□ 1.74
SNX3-202ENST00000349379 BIN2Q9UBW5 565 aaPredicted RBP25.91■■□□□ 1.74
SNX3-202ENST00000349379 CCL5P13501 91 aa25.9■■□□□ 1.74
SNX3-202ENST00000349379 GPATCH4Q5T3I0 446 aaKnown RBP25.9■■□□□ 1.74
SNX3-202ENST00000349379 MAP3K21Q5TCX8 1036 aa25.9■■□□□ 1.74
SNX3-202ENST00000349379 MTA3Q9BTC8 594 aa25.9■■□□□ 1.74
SNX3-202ENST00000349379 RANBP17Q9H2T7 1088 aaKnown RBP25.9■■□□□ 1.74
SNX3-202ENST00000349379 GPCPD1Q9NPB8 672 aa25.9■■□□□ 1.74
SNX3-202ENST00000349379 CTDP1Q9Y5B0 961 aaPredicted RBP25.9■■□□□ 1.74
SNX3-202ENST00000349379 LCTP09848 1927 aa25.89■■□□□ 1.74
SNX3-202ENST00000349379 COBLO75128 1261 aa25.89■■□□□ 1.74
SNX3-202ENST00000349379 MYCP01106 439 aaPredicted RBP25.89■■□□□ 1.74
SNX3-202ENST00000349379 FCER1AP12319 257 aa25.89■■□□□ 1.74
SNX3-202ENST00000349379 ZKSCAN1P17029 563 aaPredicted RBP25.89■■□□□ 1.74
SNX3-202ENST00000349379 SLC16A2P36021 539 aa25.89■■□□□ 1.74
SNX3-202ENST00000349379 TRIM32Q13049 653 aa25.89■■□□□ 1.74
SNX3-202ENST00000349379 SYDE2Q5VT97 1194 aa25.89■■□□□ 1.74
SNX3-202ENST00000349379 UNC93B1Q9H1C4 597 aa25.89■■□□□ 1.74
SNX3-202ENST00000349379 FLRT1Q9NZU1 646 aa25.89■■□□□ 1.74
SNX3-202ENST00000349379 COL9A3Q14050 684 aaPredicted RBP25.88■■□□□ 1.73
SNX3-202ENST00000349379 TSGA10IPQ3SY00 556 aa25.88■■□□□ 1.73
SNX3-202ENST00000349379 RNF20Q5VTR2 975 aa25.88■■□□□ 1.73
SNX3-202ENST00000349379 IGDCC4Q8TDY8 1250 aa25.88■■□□□ 1.73
SNX3-202ENST00000349379 MMP19Q99542 508 aa25.88■■□□□ 1.73
SNX3-202ENST00000349379 PAK6Q9NQU5 681 aaPredicted RBP25.88■■□□□ 1.73
SNX3-202ENST00000349379 MCM3APO60318 1980 aa25.87■■□□□ 1.73
SNX3-202ENST00000349379 IFIT3O14879 490 aaKnown RBP25.87■■□□□ 1.73
SNX3-202ENST00000349379 GJB1P08034 283 aa25.87■■□□□ 1.73
SNX3-202ENST00000349379 ASPRV1Q53RT3 343 aa25.87■■□□□ 1.73
SNX3-202ENST00000349379 CHST3Q7LGC8 479 aa25.87■■□□□ 1.73
SNX3-202ENST00000349379 CHST13Q8NET6 341 aa25.87■■□□□ 1.73
SNX3-202ENST00000349379 RNF208Q9H0X6 261 aa25.87■■□□□ 1.73
SNX3-202ENST00000349379 SENP2Q9HC62 589 aa25.87■■□□□ 1.73
SNX3-202ENST00000349379 SLC34A2O95436 690 aa25.86■■□□□ 1.73
SNX3-202ENST00000349379 KCTD2Q14681 263 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms